Noise reduction in X-ray photon correlation spectroscopy with convolutional neural networks encoder-decoder models.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
20 07 2021
Historique:
received: 03 02 2021
accepted: 10 05 2021
entrez: 21 7 2021
pubmed: 22 7 2021
medline: 22 7 2021
Statut: epublish

Résumé

Like other experimental techniques, X-ray photon correlation spectroscopy is subject to various kinds of noise. Random and correlated fluctuations and heterogeneities can be present in a two-time correlation function and obscure the information about the intrinsic dynamics of a sample. Simultaneously addressing the disparate origins of noise in the experimental data is challenging. We propose a computational approach for improving the signal-to-noise ratio in two-time correlation functions that is based on convolutional neural network encoder-decoder (CNN-ED) models. Such models extract features from an image via convolutional layers, project them to a low dimensional space and then reconstruct a clean image from this reduced representation via transposed convolutional layers. Not only are ED models a general tool for random noise removal, but their application to low signal-to-noise data can enhance the data's quantitative usage since they are able to learn the functional form of the signal. We demonstrate that the CNN-ED models trained on real-world experimental data help to effectively extract equilibrium dynamics' parameters from two-time correlation functions, containing statistical noise and dynamic heterogeneities. Strategies for optimizing the models' performance and their applicability limits are discussed.

Identifiants

pubmed: 34285272
doi: 10.1038/s41598-021-93747-y
pii: 10.1038/s41598-021-93747-y
pmc: PMC8292438
doi:

Types de publication

Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

14756

Informations de copyright

© 2021. The Author(s).

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Auteurs

Tatiana Konstantinova (T)

Brookhaven National Laboratory, NSLS-II, Upton, NY, 11973, USA.

Lutz Wiegart (L)

Brookhaven National Laboratory, NSLS-II, Upton, NY, 11973, USA.

Maksim Rakitin (M)

Brookhaven National Laboratory, NSLS-II, Upton, NY, 11973, USA.

Anthony M DeGennaro (AM)

Brookhaven National Laboratory, NSLS-II, Upton, NY, 11973, USA. adegennaro@bnl.gov.

Andi M Barbour (AM)

Brookhaven National Laboratory, NSLS-II, Upton, NY, 11973, USA. abarbour@bnl.gov.

Classifications MeSH