PHOTONAI-A Python API for rapid machine learning model development.
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2021
2021
Historique:
received:
30
03
2021
accepted:
20
06
2021
entrez:
21
7
2021
pubmed:
22
7
2021
medline:
9
11
2021
Statut:
epublish
Résumé
PHOTONAI is a high-level Python API designed to simplify and accelerate machine learning model development. It functions as a unifying framework allowing the user to easily access and combine algorithms from different toolboxes into custom algorithm sequences. It is especially designed to support the iterative model development process and automates the repetitive training, hyperparameter optimization and evaluation tasks. Importantly, the workflow ensures unbiased performance estimates while still allowing the user to fully customize the machine learning analysis. PHOTONAI extends existing solutions with a novel pipeline implementation supporting more complex data streams, feature combinations, and algorithm selection. Metrics and results can be conveniently visualized using the PHOTONAI Explorer and predictive models are shareable in a standardized format for further external validation or application. A growing add-on ecosystem allows researchers to offer data modality specific algorithms to the community and enhance machine learning in the areas of the life sciences. Its practical utility is demonstrated on an exemplary medical machine learning problem, achieving a state-of-the-art solution in few lines of code. Source code is publicly available on Github, while examples and documentation can be found at www.photon-ai.com.
Identifiants
pubmed: 34288935
doi: 10.1371/journal.pone.0254062
pii: PONE-D-21-10500
pmc: PMC8294542
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0254062Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
Références
Front Neuroinform. 2014 Feb 21;8:14
pubmed: 24600388
PLoS One. 2017 Jul 20;12(7):e0181001
pubmed: 28727739
BMC Med Inform Decis Mak. 2020 Feb 3;20(1):16
pubmed: 32013925