Efficacy of Location-Based Features for Survival Prediction of Patients With Glioblastoma Depending on Resection Status.

BraTS2019 artificial neural network feature selection glioblastoma machine learning radiomics tumor location

Journal

Frontiers in oncology
ISSN: 2234-943X
Titre abrégé: Front Oncol
Pays: Switzerland
ID NLM: 101568867

Informations de publication

Date de publication:
2021
Historique:
received: 19 03 2021
accepted: 14 06 2021
entrez: 23 7 2021
pubmed: 24 7 2021
medline: 24 7 2021
Statut: epublish

Résumé

Cancer stands out as one of the fatal diseases people are facing all the time. Each year, a countless number of people die because of the late diagnosis of cancer or wrong treatments. Glioma, one of the most common primary brain tumors, has different aggressiveness and sub-regions, which can affect the risk of disease. Although prediction of overall survival based on multimodal magnetic resonance imaging (MRI) is challenging, in this study, we assess if and how location-based features of tumors can affect overall survival prediction. This approach is evaluated independently and in combination with radiomic features. The process is carried out on a data set entailing MRI images of patients with glioblastoma. To assess the impact of resection status, the data set is divided into two groups, patients were reported as gross total resection and unknown resection status. Then, different machine learning algorithms were used to evaluate how location features are linked with overall survival. Results from regression models indicate that location-based features have considerable effects on the patients' overall survival independently. Additionally, classifier models show an improvement in prediction accuracy by the addition of location-based features to radiomic features.

Identifiants

pubmed: 34295809
doi: 10.3389/fonc.2021.661123
pmc: PMC8290179
doi:

Types de publication

Journal Article

Langues

eng

Pagination

661123

Commentaires et corrections

Type : ErratumIn

Informations de copyright

Copyright © 2021 Soltani, Bonakdar, Shakourifar, Babaie and Raahemifar.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Front Neurosci. 2017 Oct 06;11:543
pubmed: 29056896
Sci Rep. 2017 Oct 30;7(1):14331
pubmed: 29085044
Eur Radiol. 2017 Oct;27(10):4188-4197
pubmed: 27778090
Radiology. 2016 Feb;278(2):563-77
pubmed: 26579733
Sci Rep. 2019 Jan 31;9(1):1103
pubmed: 30705340
Med Biol Eng Comput. 2020 Aug;58(8):1767-1777
pubmed: 32488372
J Neurol Sci. 2008 Jun 15;269(1-2):180-3
pubmed: 18255100
Neuro Oncol. 2016 Mar;18(3):417-25
pubmed: 26188015
Sci Data. 2017 Sep 05;4:170117
pubmed: 28872634
Radiology. 2016 Sep;280(3):880-9
pubmed: 27326665
Front Comput Neurosci. 2020 Apr 08;14:25
pubmed: 32322196
Eur Radiol Exp. 2018 Nov 14;2(1):36
pubmed: 30426318
J Cell Mol Med. 2020 Apr;24(7):3807-3821
pubmed: 32065482
Cancer Genet. 2012 Dec;205(12):613-21
pubmed: 23238284
Radiology. 2013 May;267(2):560-9
pubmed: 23392431
Brainlesion. 2018;10670:358-368
pubmed: 30016377
IEEE Trans Med Imaging. 2015 Oct;34(10):1993-2024
pubmed: 25494501
Front Comput Neurosci. 2020 Aug 04;14:61
pubmed: 32848682
Cancer Res. 2017 Nov 1;77(21):e104-e107
pubmed: 29092951
Sci Rep. 2017 Sep 4;7(1):10353
pubmed: 28871110
IEEE Trans Med Imaging. 2010 Jun;29(6):1310-20
pubmed: 20378467
AJNR Am J Neuroradiol. 2018 Feb;39(2):208-216
pubmed: 28982791
Front Comput Neurosci. 2019 Nov 08;13:73
pubmed: 31780915
Radiat Oncol. 2018 Oct 5;13(1):197
pubmed: 30290849
PeerJ. 2018 Nov 22;6:e5982
pubmed: 30498643
J Neurooncol. 2014 Aug;119(1):207-14
pubmed: 24828264

Auteurs

Madjid Soltani (M)

Department of Mechanical Engineering, K. N. Toosi University of Technology, Tehran, Iran.
Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada.
Centre for Biotechnology and Bioengineering (CBB), University of Waterloo, Waterloo, ON, Canada.
Advanced Bioengineering Initiative Center, Computational Medicine Center, K. N. Toosi University of Technology, Tehran, Iran.

Armin Bonakdar (A)

Department of Mechanical Engineering, K. N. Toosi University of Technology, Tehran, Iran.

Nastaran Shakourifar (N)

Department of Mechanical Engineering, K. N. Toosi University of Technology, Tehran, Iran.

Reza Babaie (R)

Department of Mechanical Engineering, K. N. Toosi University of Technology, Tehran, Iran.

Kaamran Raahemifar (K)

College of Information Sciences and Technology (IST), Data Science and Artificial Intelligence Program, Penn State University, State College, Pennsylvania, PA, United States.
Chemical Engineering Department, University of Waterloo, Waterloo, ON, Canada.
Optometry & Vision Science Department, University of Waterloo, Waterloo, ON, Canada.

Classifications MeSH