Commuting in metapopulation epidemic modeling.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
26 07 2021
Historique:
received: 01 02 2021
accepted: 12 07 2021
entrez: 27 7 2021
pubmed: 28 7 2021
medline: 5 8 2021
Statut: epublish

Résumé

The COVID-19 pandemic led authorities all over the world to imposing travel restrictions both on a national and on an international scale. Understanding the effect of such restrictions requires analysis of the role of commuting and calls for a metapopulation modeling that incorporates both local, intra-community infection and population exchange between different locations. Standard metapopulation models are formulated as markovian processes, and as such they do not label individuals according to their original location. However, commuting from home to work and backwards (reverse commuting) is the main pattern of transportation. Thus, it is important to be able to accurately model the effect of commuting on epidemic spreading. In this study we develop a methodology for modeling bidirectional commuting of individuals, without keeping track of each individual separately and with no need of proliferation of number of compartments beyond those defined by the epidemiologic model. We demonstrate the method using a city map of the state of Israel. The presented algorithm does not require any special computation resources and it may serve as a basis for intervention strategy examination in various levels of complication and resolution. We show how to incorporate an epidemiological model into a metapopulation commuting scheme while preserving the internal logic of the epidemiological modeling. The method is general and independent on the details of the epidemiological model under consideration.

Identifiants

pubmed: 34312464
doi: 10.1038/s41598-021-94672-w
pii: 10.1038/s41598-021-94672-w
pmc: PMC8313540
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

15198

Informations de copyright

© 2021. The Author(s).

Références

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Auteurs

Azi Lipshtat (A)

Soreq Nuclear Research Center, Yavne, 81800, Israel. Eliezerli@soreq.gov.il.

Roger Alimi (R)

Soreq Nuclear Research Center, Yavne, 81800, Israel.

Yochai Ben-Horin (Y)

Soreq Nuclear Research Center, Yavne, 81800, Israel.

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