Multicenter Prospective Cohort Study of the Diagnostic Yield and Patient Experience of Multiplex Gene Panel Testing For Hereditary Cancer Risk.


Journal

JCO precision oncology
ISSN: 2473-4284
Titre abrégé: JCO Precis Oncol
Pays: United States
ID NLM: 101705370

Informations de publication

Date de publication:
Mar 2019
Historique:
accepted: 03 12 2018
entrez: 29 7 2021
pubmed: 28 3 2019
medline: 28 3 2019
Statut: epublish

Résumé

Multiplex gene panel testing (MGPT) allows for the simultaneous analysis of germline cancer susceptibility genes. This study describes the diagnostic yield and patient experiences of MGPT in diverse populations. This multicenter, prospective cohort study enrolled participants from three cancer genetics clinics-University of Southern California Norris Comprehensive Cancer Center, Los Angeles County and University of Southern California Medical Center, and Stanford Cancer Institute-who met testing guidelines or had a 2.5% or greater probability of a pathogenic variant (N = 2,000). All patients underwent 25- or 28-gene MGPT and results were compared with differential genetic diagnoses generated by pretest expert clinical assessment. Post-test surveys on distress, uncertainty, and positive experiences were administered at 3 months (69% response rate) and 1 year (57% response rate). Of 2,000 participants, 81% were female, 41% were Hispanic, 26% were Spanish speaking only, and 30% completed high school or less education. A total of 242 participants (12%) carried one or more pathogenic variant (positive), 689 (34%) carried one or more variant of uncertain significance (VUS), and 1,069 (53%) carried no pathogenic variants or VUS (negative). More than one third of pathogenic variants (34%) were not included in the differential diagnosis. After testing, few patients (4%) had prophylactic surgery, most (92%) never regretted testing, and most (80%) wanted to know all results, even those of uncertain significance. Positive patients were twice as likely as negative/VUS patients (83% In a racially/ethnically and socioeconomically diverse cohort, MGPT increased diagnostic yield. More than one third of identified pathogenic variants were not clinically anticipated. Patient regret and prophylactic surgery use were low, and patients appropriately encouraged relatives to be tested for clinically relevant results.

Identifiants

pubmed: 34322651
doi: 10.1200/PO.18.00217
pii: 1800217
pmc: PMC8260917
pii:
doi:

Types de publication

Journal Article

Langues

eng

Informations de copyright

© 2018 by American Society of Clinical Oncology.

Déclaration de conflit d'intérêts

Employees of Myriad Genetic Laboratories served as coinvestigators in this study and provided material support, including germline testing and interpretation, as described in the manuscript. The specific coinvestigators listed as authors participated in the review and final approval of the submitted manuscript.

Références

Genet Test Mol Biomarkers. 2013 May;17(5):367-75
pubmed: 23448386
Nat Rev Clin Oncol. 2016 Sep;13(9):581-8
pubmed: 27296296
Clin Genet. 2014 Dec;86(6):510-20
pubmed: 24506336
Gynecol Oncol. 2012 Dec;127(3):544-51
pubmed: 22940489
Genet Med. 2018 Feb;20(2):234-239
pubmed: 28749474
J Natl Compr Canc Netw. 2017 Dec;15(12):1465-1475
pubmed: 29223984
Health Psychol. 2002 Nov;21(6):564-72
pubmed: 12433008
Cancer Genet. 2016 Apr;209(4):130-7
pubmed: 26908360
Cancer Epidemiol Biomarkers Prev. 2011 Mar;20(3):522-9
pubmed: 21307304
J Clin Oncol. 2017 Jul 10;35(20):2232-2239
pubmed: 28402748
N Engl J Med. 2011 Feb 10;364(6):524-34
pubmed: 21226570
Genet Med. 2016 Jan;18(1):25-33
pubmed: 25834950
J Clin Oncol. 2013 Jul 20;31(21):2743-8
pubmed: 23766521
J Clin Oncol. 2015 Nov 1;33(31):3660-7
pubmed: 26324357
Proc Natl Acad Sci U S A. 2010 Jul 13;107(28):12629-33
pubmed: 20616022
J Clin Oncol. 2014 May 1;32(13):1317-23
pubmed: 24663044
J Clin Oncol. 2016 May 1;34(13):1455-9
pubmed: 26786923
Am J Hum Genet. 2016 May 5;98(5):801-817
pubmed: 27153395
Clin Gastroenterol Hepatol. 2008 Mar;6(3):333-8
pubmed: 18258490
JAMA Oncol. 2015 Jun;1(3):277-8
pubmed: 26181167
JAMA Oncol. 2015 Oct;1(7):943-51
pubmed: 26270727
Gastroenterology. 2015 Sep;149(3):604-13.e20
pubmed: 25980754
J Clin Oncol. 2014 Jul 1;32(19):2001-9
pubmed: 24733792
JAMA Oncol. 2017 Mar 1;3(3):391-397
pubmed: 28033448
Cancer Biol Med. 2016 Mar;13(1):55-67
pubmed: 27144062
J Natl Compr Canc Netw. 2017 Jan;15(1):9-20
pubmed: 28040716
Cancer Prev Res (Phila). 2011 Jan;4(1):9-22
pubmed: 21088223
J Clin Oncol. 2018 Feb 1;36(4):414-424
pubmed: 29236593
Clin Genet. 2014 Sep;86(3):229-37
pubmed: 24304220
Genet Med. 2015 Jan;17(1):70-87
pubmed: 25394175
J Clin Oncol. 2016 May 1;34(13):1460-8
pubmed: 26976419
JAMA Oncol. 2017 Sep 1;3(9):1190-1196
pubmed: 28418444
Proc Natl Acad Sci U S A. 2011 Nov 1;108(44):18032-7
pubmed: 22006311
JAMA Oncol. 2018 Aug 1;4(8):1066-1072
pubmed: 29801090
BMC Cancer. 2015 Apr 02;15:215
pubmed: 25886519
J Clin Oncol. 2016 Dec;34(34):4071-4078
pubmed: 27621404
Genet Med. 2015 May;17(5):405-24
pubmed: 25741868
J Clin Oncol. 2017 Apr 1;35(10):1086-1095
pubmed: 28135145
JAMA. 2017 Sep 5;318(9):825-835
pubmed: 28873162
N Engl J Med. 2015 Jun 4;372(23):2243-57
pubmed: 26014596
Cancer Genet. 2017 Dec;218-219:58-68
pubmed: 29153097
J Genet Couns. 2017 Oct;26(5):1116-1129
pubmed: 28357778
Front Oncol. 2015 Sep 29;5:208
pubmed: 26484312
Breast Cancer Res Treat. 2014 Aug;147(1):119-32
pubmed: 25085752
J Natl Cancer Inst. 2018 Oct 1;110(10):1059-1066
pubmed: 29618041

Auteurs

Gregory E Idos (GE)

University of Southern California, Los Angeles, CA.

Allison W Kurian (AW)

Stanford University School of Medicine, Stanford, CA.

Charité Ricker (C)

University of Southern California, Los Angeles, CA.

Duveen Sturgeon (D)

University of Southern California, Los Angeles, CA.

Julie O Culver (JO)

University of Southern California, Los Angeles, CA.

Kerry E Kingham (KE)

Stanford University School of Medicine, Stanford, CA.

Rachel Koff (R)

Stanford University School of Medicine, Stanford, CA.

Nicolette M Chun (NM)

Stanford University School of Medicine, Stanford, CA.

Courtney Rowe-Teeter (C)

Stanford University School of Medicine, Stanford, CA.

Alexandra P Lebensohn (AP)

Stanford University School of Medicine, Stanford, CA.

Peter Levonian (P)

Stanford University School of Medicine, Stanford, CA.

Katrina Lowstuter (K)

University of Southern California, Los Angeles, CA.

Katlyn Partynski (K)

University of Southern California, Los Angeles, CA.

Christine Hong (C)

University of Southern California, Los Angeles, CA.

Meredith A Mills (MA)

Stanford University School of Medicine, Stanford, CA.

Iva Petrovchich (I)

Stanford University School of Medicine, Stanford, CA.

Cindy S Ma (CS)

Stanford University School of Medicine, Stanford, CA.

Anne-Renee Hartman (AR)

Myriad Genetics, Salt Lake City, UT.

Brian Allen (B)

Myriad Genetics, Salt Lake City, UT.

Richard J Wenstrup (RJ)

Myriad Genetics, Salt Lake City, UT.

Johnathan M Lancaster (JM)

Myriad Genetics, Salt Lake City, UT.

Krystal Brown (K)

Myriad Genetics, Salt Lake City, UT.

John Kidd (J)

Myriad Genetics, Salt Lake City, UT.

Brent Evans (B)

Myriad Genetics, Salt Lake City, UT.

Bhramar Mukherjee (B)

University of Michigan, Ann Arbor, MI.

Kevin J McDonnell (KJ)

University of Southern California, Los Angeles, CA.

Uri Ladabaum (U)

Stanford University School of Medicine, Stanford, CA.

James M Ford (JM)

Stanford University School of Medicine, Stanford, CA.

Stephen B Gruber (SB)

University of Southern California, Los Angeles, CA.

Classifications MeSH