Environmental sampling for the detection of foot-and-mouth disease virus and peste des petits ruminants virus in a live goat market, Nepal.
FMD
PPR
foot and mouth disease
peste des petits ruminants
surveillance
Journal
Transboundary and emerging diseases
ISSN: 1865-1682
Titre abrégé: Transbound Emerg Dis
Pays: Germany
ID NLM: 101319538
Informations de publication
Date de publication:
Sep 2022
Sep 2022
Historique:
received:
07
04
2021
accepted:
20
07
2021
pubmed:
1
8
2021
medline:
30
9
2022
entrez:
31
7
2021
Statut:
ppublish
Résumé
Livestock markets are considered vital parts of the agricultural economy, particularly in developing countries where livestock keeping contributes to both food security and economic stability. Animals from diverse sources are moved to markets, they mix while they are there and are subsequently redistributed over wide geographic areas. Consequently, markets provide an opportunity for targeted surveillance for circulating pathogens. This study investigated the use of environmental sampling at a live goat market in Nepal for the detection of foot-and-mouth disease virus (FMDV) and peste des petits ruminants virus (PPRV), both of which are endemic. Five visits to the market were carried out between November 2016 and April 2018, with FMDV RNA detected on four visits and PPRV RNA detected on all five visits. Overall, 4.1% of samples (nine out of 217) were positive for FMDV RNA and 60.8% (132 out of 217) were positive for PPRV RNA, though the proportion of positive samples varied amongst visits. These results demonstrate that non-invasive, environmental sampling methods have the potential to be used to detect circulation of high priority livestock diseases at a live animal market and, hence, to contribute to their surveillance and control.
Substances chimiques
RNA, Viral
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
3041-3046Subventions
Organisme : Department for the Environment, Food and Rural Affairs
ID : SE2816
Organisme : Biotechnology and Biological Sciences Research Council
ID : BBS/E/I/00007036
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BBS/E/I/00007037
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/T004096/1
Pays : United Kingdom
Informations de copyright
© 2021 The Authors. Transboundary and Emerging Diseases published by Wiley-VCH GmbH.
Références
Alexandersen, S., Zhang Z., Donaldson A., & Garland A. J. (2003). The pathogenesis and diagnosis of foot-and-mouth disease. Journal of Comparative Pathology, 129, 1-36, https://doi.org/10.1016/S0021-9975(03)00041-0.
Baazizi, R., Mahapatra M., Clarke B. D., Ait-Oudhia K., Khelef D., & Parida S. (2017). Peste des petits ruminants (PPR): A neglected tropical disease in Maghreb region of North Africa and its threat to Europe. PLoS One, 12, e0175461, https://doi.org/10.1371/journal.pone.0175461.
Baron, M. D., Diallo A., Lancelot R., & Libeau G. (2016). Peste des petits ruminants virus. Advances in Virus Research, 95, 1-42, https://doi.org/10.1016/bs.aivir.2016.02.001.
Bartley, L. M., Donnelly C. A., & Anderson R. M. (2002). Review of foot-and mouth disease virus survival in animal excretions and on fomites. Veterinary Record, 151, 667-669, https://doi.org/10.1136/vr.151.22.667.
Bates, T. W., Thurmond M. C., Hietala S. K., Venkateswaran K. S., Wilson T. M., Colston B. W., Trebes J. E., & Milanovich F. P. (2003). Surveillance for detection of foot-and-mouth disease. Journal of the American Veterinary Medical Association, 223, 609-614, https://doi.org/10.2460/javma.2003.223.609.
Batten, C. A., Banyard A. C., King D. P., Henstock M. R., Edwards L., Sanders A., Buczkowski H., Oura C. C. L., & Barrett T. (2011). A real time RT-PCR assay for the specific detection of Peste des petits ruminants virus. Journal of Virological Methods, 171, 401-404, https://doi.org/10.1016/j.jviromet.2010.11.022.
Brown, E., Nelson N., Gubbins S., & Colenutt C. (2021). Environmental and air sampling are efficient methods for the detection and quantification of foot-and-mouth disease virus. Journal of Virological Methods, 287, 113988, https://doi.org/10.1016/j.jviromet.2020.113988.
Callahan, J. D., Brown F., Osorio F. A., Sur J. H., Kramer E., Long G. W., Lubroth J., Ellis S. J., Shoulars K. S., Gaffney K. L., Rock D. L., & Nelson W. M. (2002). Use of a portable real-time reverse transcriptase-polymerase chain reaction assay for rapid detection of foot-and-mouth disease virus. Journal of the American Veterinary Medical Association, 220, 1636-1642.
Chen, Z., Li K., Luo L., Lu, E., Yuan J., Liu H., Lu J., Di B., Xiao X., & Yang Z. (2014). Detection of avian influenza A(H7N9) virus from live poultry markets in Guangzhou, China: A surveillance report. PLoS One, 9, e107266, https://doi.org/10.1371/journal.pone.0107266.
Colenutt, C., Brown E., Nelson N., Wadsworth J., Maud J., Adhikari B., Chapagain Kafle S., Upadhyaya M., Kafle Pandey S., Paton D. J., Sumption K., & Gubbins S. (2018). Evaluation of environmental sampling as a low technology method for surveillance of Foot-and-mouth disease virus in an area of endemicity. Applied and Environment Microbiology, 84, AEM.00686-18, https://doi.org/10.1128/AEM.00686-18.
Diallo, A. (2006). Control of peste des petits ruminants and poverty alleviation? Journal of Veterinary Medicine Series B Infectious Diseases and Veterinary Public Health, 53, 11-13, https://doi.org/10.1111/j.1439-0450.2006.01012.x.
FAO (2011). The Progressive Control Pathway for FMD control (PCP-FMD) Principles, Stage Descriptions and Standards.
Fèvre, E. M., de C Bronsvoort B. M., Hamilton K. A., & Cleaveland S. (2006). Animal movements and the spread of infectious diseases. Trends in Microbiology, 14, 125-131, https://doi.org/10.1016/j.tim.2006.01.004.
Fournié, G., & Pfeiffer D. U. (2013). Monitoring and controlling disease spread through live animal market networks. Veterinary Journal, 195, 8-9, https://doi.org/10.1016/j.tvjl.2012.09.014.
Ganime, A. C., Leite J. P. G., de Abreu Corrêa A., Melgaço F. G., Carvalho-Costa F. A., & Miagostovich M. P. (2015). Evaluation of the swab sampling method to recover viruses from fomites. Journal of Virological Methods, 217, 24-27, https://doi.org/10.1016/j.jviromet.2015.02.009.
Government of Nepal, M. of A.D. (2016). Statistical information on Nepalese agriculture 2015-16.
Knight-Jones, T. J. D., Robinson L., Charleston B., Rodriguez L. L., Gay C. G., Sumption K. J., & Vosloo W. (2016). Global foot-and-mouth disease research update and gap analysis: 1 - Overview of global status and research needs. Transboundary and Emerging Diseases, 63, 3-13, https://doi.org/10.1111/tbed.12528.
Knight-Jones, T. J. D., & Rushton J. (2013). The economic impacts of foot and mouth disease - What are they, how big are they and where do they occur? Preventive Veterinary Medicine, 112, 161-173, https://doi.org/10.1016/j.prevetmed.2013.07.013.
Knowles, N. J., Bachanek-Bankowska K., Wadsworth J., Mioulet V., Valdazo-González B., Eldaghayes I. M., Dayhum A. S., Kammon A. M., Sharif M. A., Waight S., Shamia A. M., Tenzin S., Wernery U., Grazioli S., Brocchi E., Subramaniam S., Pattnaik B., & King D. P. (2016a). Outbreaks of foot-and-mouth disease in Libya and Saudi Arabia during 2013 due to an exotic O/ME-SA/Ind-2001 lineage virus. Transboundary and Emerging Disease, 63, e431-e435, https://doi.org/10.1111/tbed.12299.
Knowles, N. J., Wadsworth J., Bachanek-Bankowska K., & King D. P. (2016b). VP1 sequencing protocol for foot-and-mouth disease virus molecular epidemiology. Revue Scientifique et Technique l'OIE, 35, 741-755, https://doi.org/10.20506/rst.35.3.2565
Mahapatra, M., & Parida S. (2018). Foot and mouth disease vaccine strain selection: Current approaches and future perspectives. Expert Review of Vaccines, 17, 577-591, https://doi.org/10.1080/14760584.2018.1492378.
Motta, P., Porphyre T., Handel I. G., Hamman S. M., Ngwa V. N., Tanya V. N., Morgan K. L., & de B. M., & Bronsvoort C. (2019). Characterizing livestock markets, primary diseases, and key management practices along the livestock supply chain in Cameroon. Frontiers in Veterinary Science, 6, 1-14, https://doi.org/10.3389/fvets.2019.00101.
OIE and FAO (2015). Global strategy for the control and eradication of PPR. FAOOIE.
Parida, S., Muniraju M., Mahapatra M., Muthuchelvan D., Buczkowski H., & Banyard A. C. (2015). Peste des petits ruminants. Veterinary Microbiology, 181, 90-106, https://doi.org/10.1016/j.vetmic.2015.08.009.
Parida, S., Selvaraj M., Gubbins S., Pope R., Banyard A., & Mahapatra M. (2020). Quantifying levels of peste des petits ruminants (PPR) virus in excretions from experimentally Infected goats and Its importance for nascent PPR eradication programme. Viruses, 11, 249, https://doi.org/10.3390/v11030249.
Ranabijuli, S., Mohapatra J. K., Pandey L. K., Rout M., Sanyal A., Dash B. B., Sarangi L. N., Panda H. K., & Pattnaik B. (2010). Serological evidence of foot-and-mouth disease virus infection in randomly surveyed goat population of Orissa, India. Transbound. Emerg. Dis., 57, 448-454, https://doi.org/10.1111/j.1865-1682.2010.01161.x.
Robinson, S. E., & Christley R. M. (2007). Exploring the role of auction markets in cattle movements within Great Britain. Preventive Veterinary Medicine, 81, 21-37, https://doi.org/10.1016/j.prevetmed.2007.04.011.
Saduakassova, M. A., Sultanov A. A., Kutumbetov L. B., Wadsworth J., AWood B., Knowles N. J., King D. P., & Bachanek-Bankowska K. (2017). Development and evaluation of a novel real-time RT-PCR to detect foot-and-mouth disease viruses from the emerging A/ASIA/G-VII lineage. Journal of Virological Methods, 252, 37-41, https://doi.org/10.1016/j.jviromet.2017.10.023.
Senthil Kumar, K., Babu A., Sundarapandian G., Roy P., Thangavelu A., Siva Kumar K., Arumugam R., Chandran N. D. J., Muniraju M., Mahapatra M., Banyard A. C., Manohar B. M., & Parida S. (2014). Molecular characterisation of lineage IV peste des petits ruminants virus using multi gene sequence data. Veterinary Microbiology, 174, 39-49, https://doi.org/10.1016/j.vetmic.2014.08.031.
Singanallur, N. B., Anderson D. E., Sessions O. M., Kamaraj U. S., Bowden T. R., Horsington J., Cowled C., Wang L. F., & Vosloo W. (2019). Probe capture enrichment next-generation sequencing of complete foot-and-mouth disease virus genomes in clinical samples. Journal of Virological Methods, 272, 113703, https://doi.org/10.1016/j.jviromet.2019.113703.
Vallée, E., Waret-Szkuta A., Chaka H., Duboz R., Balcha M., & Goutard F. (2013). Analysis of traditional poultry trader networks to improve risk-based surveillance. Veterinary Journal, 195, 59-65, https://doi.org/10.1016/j.tvjl.2012.05.017.
Vergne, T., Meyer A., Long P. T., Elkholly D. A., Inui K., Padungtod P., Newman S. H., Fournié G., & Pfeiffer D. U. (2019). Optimising the detectability of H5N1 and H5N6 highly pathogenic avian influenza viruses in Vietnamese live-bird markets. Scientific Reports, 9, 1031, https://doi.org/10.1038/s41598-018-37616-1.