Super-Selective Reconstruction of Causal and Direct Connectivity With Application to

MEA apparent connectivity correlation effective connectivity functional connectivity iPSC neuronal network

Journal

Frontiers in neuroscience
ISSN: 1662-4548
Titre abrégé: Front Neurosci
Pays: Switzerland
ID NLM: 101478481

Informations de publication

Date de publication:
2021
Historique:
received: 30 12 2020
accepted: 31 05 2021
entrez: 2 8 2021
pubmed: 3 8 2021
medline: 3 8 2021
Statut: epublish

Résumé

Despite advancements in the development of cell-based

Identifiants

pubmed: 34335152
doi: 10.3389/fnins.2021.647877
pmc: PMC8323822
doi:

Types de publication

Journal Article

Langues

eng

Pagination

647877

Informations de copyright

Copyright © 2021 Puppo, Pré, Bang and Silva.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Biomed Opt Express. 2019 Jan 23;10(2):789-806
pubmed: 30800515
J Comput Neurosci. 2011 Feb;30(1):45-67
pubmed: 20706781
J Neural Eng. 2016 Apr;13(2):026023
pubmed: 26912115
Nat Commun. 2018 May 23;9(1):2035
pubmed: 29789548
Nature. 2006 Apr 20;440(7087):1007-12
pubmed: 16625187
BMC Neurosci. 2006 Feb 07;7:11
pubmed: 16464257
Nature. 2011 May 12;473(7346):221-5
pubmed: 21490598
PLoS Comput Biol. 2018 Aug 27;14(8):e1006381
pubmed: 30148879
Nano Lett. 2017 May 10;17(5):2757-2764
pubmed: 28384403
Prog Neurobiol. 2005 Sep-Oct;77(1-2):1-37
pubmed: 16289760
Cell Stem Cell. 2019 Oct 3;25(4):558-569.e7
pubmed: 31474560
Cell Rep. 2014 Nov 20;9(4):1173-82
pubmed: 25456120
Biochem Biophys Res Commun. 2014 Jan 24;443(4):1176-81
pubmed: 24406164
Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):1731-6
pubmed: 22307639
Nat Rev Neurosci. 2015 Aug;16(8):487-97
pubmed: 26152865
PLoS Comput Biol. 2010 Mar 12;6(3):e1000711
pubmed: 20300651
Stem Cell Reports. 2015 Oct 13;5(4):546-57
pubmed: 26411903
Sci Rep. 2018 Jul 11;8(1):10460
pubmed: 29992977
Adv Sci (Weinh). 2018 Mar 10;5(6):1700625
pubmed: 29938162
Lab Chip. 2015 Jul 7;15(13):2767-80
pubmed: 25973786
PLoS One. 2014 Jun 06;9(6):e98842
pubmed: 24905689
Dev Cogn Neurosci. 2019 Apr;36:100607
pubmed: 30579789
PLoS Biol. 2005 Mar;3(3):e68
pubmed: 15737062
Int J Neural Syst. 2007 Apr;17(2):87-103
pubmed: 17565505
J Am Chem Soc. 2015 Aug 26;137(33):10767-76
pubmed: 26237573
Curr Opin Neurobiol. 2013 Apr;23(2):162-71
pubmed: 23294553
Front Neurol. 2018 Apr 16;9:237
pubmed: 29713304
Front Neuroanat. 2014 Nov 20;8:137
pubmed: 25477790
Front Syst Neurosci. 2016 Jan 08;9:175
pubmed: 26778976
J Neurophysiol. 1982 Dec;48(6):1321-35
pubmed: 7153795
J Neurosci Methods. 2005 Jun 15;144(2):265-79
pubmed: 15910987
Neuroimage. 2003 Aug;19(4):1273-302
pubmed: 12948688
Phys Rev E Stat Nonlin Soft Matter Phys. 2001 Jul;64(1 Pt 1):011920
pubmed: 11461301
Nat Neurosci. 2005 Sep;8(9):1263-8
pubmed: 16116447
PLoS One. 2009 Aug 04;4(8):e6482
pubmed: 19652720
J Neurosci. 2019 Oct 16;39(42):8275-8284
pubmed: 31619497
PLoS Comput Biol. 2005 Sep;1(4):e42
pubmed: 16201007
J Neurophysiol. 2002 Nov;88(5):2196-206
pubmed: 12424261
Cereb Cortex. 2000 Jan;10(1):82-92
pubmed: 10639398
Brain Res Bull. 2015 Oct;119(Pt B):106-17
pubmed: 25931392
Sci Rep. 2020 Mar 9;10(1):4279
pubmed: 32152369
Cell Stem Cell. 2018 May 3;22(5):684-697.e9
pubmed: 29727680
Neural Comput. 2019 Dec;31(12):2492-2522
pubmed: 31614102
Ann N Y Acad Sci. 2020 Jul;1471(1):18-56
pubmed: 30875083
Cell Rep. 2014 Apr 10;7(1):1-11
pubmed: 24703839
J Neurosci. 2008 Oct 15;28(42):10734-45
pubmed: 18923048
Math Biosci Eng. 2014 Feb;11(1):149-65
pubmed: 24245678
J Neurosci Methods. 2010 Feb 15;186(2):262-73
pubmed: 19961876
Brain Connect. 2011;1(1):13-36
pubmed: 22432952
Dialogues Clin Neurosci. 2013 Sep;15(3):247-62
pubmed: 24174898
Brain Topogr. 1989 Fall-Winter;2(1-2):9-18
pubmed: 2641479
Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Apr;65(4 Pt 1):041903
pubmed: 12005869
Mol Psychiatry. 2016 Feb;21(2):178-88
pubmed: 26347316
Development. 2015 Sep 15;142(18):3178-87
pubmed: 26395144
Nat Neurosci. 2020 Oct;23(10):1286-1296
pubmed: 32895567
Biol Cybern. 2001 Jun;84(6):463-74
pubmed: 11417058
Front Cell Neurosci. 2019 Sep 06;13:404
pubmed: 31555099
Neural Netw. 2018 Jun;102:120-137
pubmed: 29571122
Cell. 2007 Nov 30;131(5):861-72
pubmed: 18035408
PLoS One. 2015 Mar 25;10(3):e0118412
pubmed: 25807389
Front Syst Neurosci. 2016 Mar 31;10:28
pubmed: 27065820
PLoS One. 2011;6(11):e27431
pubmed: 22102894
Neural Comput. 2020 Nov;32(11):2187-2211
pubmed: 32946715
Front Neuroinform. 2016 Mar 30;10:13
pubmed: 27065841
Science. 1991 May 17;252(5008):939-43
pubmed: 2035024
Q Rev Biophys. 2002 Feb;35(1):63-87
pubmed: 11997981
PLoS Comput Biol. 2012;8(8):e1002653
pubmed: 22927808
Sci Rep. 2018 Dec 12;8(1):17796
pubmed: 30542106
Front Neurosci. 2014 Dec 09;8:405
pubmed: 25538556
Nat Methods. 2014 Aug;11(8):825-33
pubmed: 24952910
Curr Opin Neurobiol. 2015 Jun;32:38-44
pubmed: 25463563
Science. 2007 Dec 21;318(5858):1917-20
pubmed: 18029452
IEEE Trans Neural Netw. 2003;14(6):1569-72
pubmed: 18244602

Auteurs

Francesca Puppo (F)

BioCircuits Institute and Center for Engineered Natural Intelligence, University of California, San Diego, La Jolla, CA, United States.

Deborah Pré (D)

Conrad Prebys Center for Chemical Genomics, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, United States.

Anne G Bang (AG)

Conrad Prebys Center for Chemical Genomics, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, United States.

Gabriel A Silva (GA)

BioCircuits Institute, Center for Engineered Natural Intelligence, Department of Bioengineering, Department of Neurosciences, University of California, San Diego, La Jolla, CA, United States.

Classifications MeSH