Evaluation of a personalized functional near infra-red optical tomography workflow using maximum entropy on the mean.
finger tapping
functional magnetic resonance imaging (fMRI)
functional near-infrared spectroscopy (fNIRS)
maximum entropy on the mean (MEM)
near infra-red optical tomography (NIROT)
personalized optimal montage
Journal
Human brain mapping
ISSN: 1097-0193
Titre abrégé: Hum Brain Mapp
Pays: United States
ID NLM: 9419065
Informations de publication
Date de publication:
15 10 2021
15 10 2021
Historique:
revised:
25
05
2021
received:
25
02
2021
accepted:
11
06
2021
pubmed:
4
8
2021
medline:
22
3
2022
entrez:
3
8
2021
Statut:
ppublish
Résumé
In the present study, we proposed and evaluated a workflow of personalized near infra-red optical tomography (NIROT) using functional near-infrared spectroscopy (fNIRS) for spatiotemporal imaging of cortical hemodynamic fluctuations. The proposed workflow from fNIRS data acquisition to local 3D reconstruction consists of: (a) the personalized optimal montage maximizing fNIRS channel sensitivity to a predefined targeted brain region; (b) the optimized fNIRS data acquisition involving installation of optodes and digitalization of their positions using a neuronavigation system; and (c) the 3D local reconstruction using maximum entropy on the mean (MEM) to accurately estimate the location and spatial extent of fNIRS hemodynamic fluctuations along the cortical surface. The workflow was evaluated on finger-tapping fNIRS data acquired from 10 healthy subjects for whom we estimated the reconstructed NIROT spatiotemporal images and compared with functional magnetic resonance imaging (fMRI) results from the same individuals. Using the fMRI activation maps as our reference, we quantitatively compared the performance of two NIROT approaches, the MEM framework and the conventional minimum norm estimation (MNE) method. Quantitative comparisons were performed at both single subject and group-level. Overall, our results suggested that MEM provided better spatial accuracy than MNE, while both methods offered similar temporal accuracy when reconstructing oxygenated (HbO) and deoxygenated hemoglobin (HbR) concentration changes evoked by finger-tapping. Our proposed complete workflow was made available in the brainstorm fNIRS processing plugin-NIRSTORM, thus providing the opportunity for other researchers to further apply it to other tasks and on larger populations.
Identifiants
pubmed: 34342073
doi: 10.1002/hbm.25566
pmc: PMC8449120
doi:
Types de publication
Evaluation Study
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
4823-4843Subventions
Organisme : CIHR
ID : CIHR MOP 133619
Pays : Canada
Informations de copyright
© 2021 The Authors. Human Brain Mapping published by Wiley Periodicals LLC.
Références
Biomed Opt Express. 2012 May 1;3(5):943-57
pubmed: 22567587
Hum Brain Mapp. 2018 Nov;39(11):4213-4227
pubmed: 29962049
Neuroimage. 2004 Apr;21(4):1732-47
pubmed: 15050594
Opt Express. 2012 Aug 27;20(18):20427-46
pubmed: 23037092
Neurophotonics. 2021 Jan;8(1):012101
pubmed: 33442557
Neuroimage. 2008 Sep 1;42(3):1069-77
pubmed: 18602485
Neuroimage. 2008 Feb 1;39(3):1104-20
pubmed: 17997111
Neuroimage Clin. 2014 Jul 22;5:309-21
pubmed: 25161897
Neuroimage. 2016 Dec;143:175-195
pubmed: 27561712
Elife. 2019 Jan 15;8:
pubmed: 30644820
J Biomed Opt. 2018 Jan;23(1):1-4
pubmed: 29374404
Hum Brain Mapp. 2016 Jul;37(7):2528-46
pubmed: 27059157
Opt Express. 2010 Nov 8;18(23):23676-90
pubmed: 21164712
Magn Reson Imaging. 2006 May;24(4):495-505
pubmed: 16677956
Comput Intell Neurosci. 2011;2011:879716
pubmed: 21584256
Biomed Opt Express. 2013 Oct 10;4(11):2411-32
pubmed: 24298404
Neuroimage. 2017 Aug 15;157:531-544
pubmed: 28619655
Science. 1977 Dec 23;198(4323):1264-7
pubmed: 929199
J Biomed Opt. 2010 Mar-Apr;15(2):026006
pubmed: 20459251
PLoS One. 2013;8(2):e55969
pubmed: 23418485
Appl Opt. 2005 Apr 1;44(10):1957-68
pubmed: 15813532
Neuroimage. 2016 Jul 15;135:287-99
pubmed: 27150232
Cereb Cortex. 2016 Apr;26(4):1558-68
pubmed: 25595183
J Neurosci Methods. 2018 Nov 1;309:91-108
pubmed: 30107210
Appl Opt. 2009 Apr 1;48(10):D137-43
pubmed: 19340101
J Neural Eng. 2020 Jun 12;17(3):035007
pubmed: 32191632
Hum Brain Mapp. 2021 Oct 15;42(15):4823-4843
pubmed: 34342073
Neurophotonics. 2017 Jan;4(1):015001
pubmed: 28149919
Clin Neurophysiol. 2021 Feb;132(2):568-580
pubmed: 33450578
Neuroimage. 2006 Mar;30(1):160-71
pubmed: 16426867
Brain Topogr. 2016 Jan;29(1):162-81
pubmed: 25609211
Neuroimage. 2006 Jul 15;31(4):1475-86
pubmed: 16650778
Neuroimage. 2012 Aug 15;62(2):782-90
pubmed: 21979382
Neuroimage. 2014 Jan 15;85 Pt 1:6-27
pubmed: 23684868
Nat Hum Behav. 2019 Aug;3(8):768-771
pubmed: 31253883
Proc Natl Acad Sci U S A. 2000 Sep 26;97(20):11050-5
pubmed: 10984517
Phys Med Biol. 1988 Dec;33(12):1433-42
pubmed: 3237772
Biomed Opt Express. 2011 Dec 1;2(12):3334-48
pubmed: 22162823
Neuroimage. 2003 Sep;20(1):479-88
pubmed: 14527608
Sci Rep. 2019 Jul 31;9(1):11115
pubmed: 31366956
Neuroimage. 2001 Dec;14(6):1370-86
pubmed: 11707093
Neuroimage. 2011 Feb 14;54(4):2808-21
pubmed: 21047559
Phys Med Biol. 2009 May 7;54(9):2683-97
pubmed: 19351982
Nat Photonics. 2014 Jun;8(6):448-454
pubmed: 25083161
Biomed Opt Express. 2010 Oct 06;1(4):1084-1103
pubmed: 21258532
Med Biol Eng Comput. 1994 Jan;32(1):35-42
pubmed: 8182960
Neuroimage. 2002 Oct;17(2):719-31
pubmed: 12377147
Neuroimage. 2005 Jun;26(2):356-73
pubmed: 15907296
Neuroimage. 2014 Jan 15;85 Pt 1:64-71
pubmed: 23810973
Proc Natl Acad Sci U S A. 1990 Dec;87(24):9868-72
pubmed: 2124706
Opt Express. 2009 Oct 26;17(22):20178-90
pubmed: 19997242
Hum Brain Mapp. 2016 May;37(5):1661-83
pubmed: 26931511
Front Neurosci. 2020 Jul 28;14:746
pubmed: 32848543
Neuroimage. 2008 Aug 1;42(1):196-206
pubmed: 18538585
Proc Natl Acad Sci U S A. 2007 Jul 17;104(29):12169-74
pubmed: 17616584
Neuroimage. 2006 Feb 1;29(3):734-53
pubmed: 16271483
Neuroimage. 2006 Jan 15;29(2):368-82
pubmed: 16303317
Neuroimage. 2012 Aug 15;62(2):953-61
pubmed: 22245339
Neuroimage. 2015 Oct 15;120:164-75
pubmed: 26188259
Hum Brain Mapp. 2018 Feb;39(2):880-901
pubmed: 29164737
Neuroimage. 2001 Jan;13(1):76-90
pubmed: 11133311
Hum Brain Mapp. 2020 Aug 1;41(11):3019-3033
pubmed: 32386115
Neuroimage. 2017 Feb 15;147:204-218
pubmed: 27939793
Front Neurosci. 2016 Mar 22;10:102
pubmed: 27047325
Neuron. 2002 Jan 31;33(3):341-55
pubmed: 11832223
Appl Opt. 2005 Apr 10;44(11):2140-53
pubmed: 15835360
Biomed Opt Express. 2018 Jun 07;9(7):2994-3016
pubmed: 30619642
Neuroimage. 2012 Jul 16;61(4):1120-8
pubmed: 22330315
Neurophotonics. 2017 Oct;4(4):041402
pubmed: 28744475
J Biomed Opt. 2014 Feb;19(2):026010
pubmed: 24525860
Neuroimage. 2014 Jan 15;85 Pt 1:192-201
pubmed: 23796546
Neuroimage. 2003 Apr;18(4):865-79
pubmed: 12725763
Neuroimage. 2017 Jul 15;155:25-49
pubmed: 28450140
Neuroimage. 2004 Apr;21(4):1300-19
pubmed: 15050557
IEEE Trans Biomed Eng. 2004 Mar;51(3):427-42
pubmed: 15000374
Rofo. 2011 Oct;183(10):956-63
pubmed: 21972043
Front Neuroenergetics. 2012 May 24;4:6
pubmed: 22654754