A Machine Learning Algorithm for Quantitatively Diagnosing Oxidative Stress Risks in Healthy Adult Individuals Based on Health Space Methodology: A Proof-of-Concept Study Using Korean Cross-Sectional Cohort Data.

composite biomarker diagnostic model elastic net regularized generalized linear model oxidative stress

Journal

Antioxidants (Basel, Switzerland)
ISSN: 2076-3921
Titre abrégé: Antioxidants (Basel)
Pays: Switzerland
ID NLM: 101668981

Informations de publication

Date de publication:
16 Jul 2021
Historique:
received: 26 05 2021
revised: 14 07 2021
accepted: 14 07 2021
entrez: 6 8 2021
pubmed: 7 8 2021
medline: 7 8 2021
Statut: epublish

Résumé

Oxidative stress aggravates the progression of lifestyle-related chronic diseases. However, knowledge and practices that enable quantifying oxidative stress are still lacking. Here, we performed a proof-of-concept study to predict the oxidative stress status in a healthy population using retrospective cohort data from Boramae medical center in Korea (

Identifiants

pubmed: 34356365
pii: antiox10071132
doi: 10.3390/antiox10071132
pmc: PMC8301183
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : National Research Foundation of Korea
ID : 2012M3A9C4048761

Références

Ann Transl Med. 2016 Jan;4(2):30
pubmed: 26889483
BMC Bioinformatics. 2010 Jul 22;11:394
pubmed: 20650002
Free Radic Biol Med. 2005 Oct 1;39(7):841-52
pubmed: 16140205
Br J Surg. 2015 Feb;102(3):148-58
pubmed: 25627261
Best Pract Res Clin Obstet Gynaecol. 2015 Jan;29(1):24-31
pubmed: 25225058
Aging Dis. 2015 Mar 10;6(2):109-20
pubmed: 25821639
N Am J Med Sci. 2011 Jul;3(7):344-7
pubmed: 22540111
Antioxid Redox Signal. 2010 Feb;12(2):185-98
pubmed: 19702440
Nucleic Acids Res. 2021 Jan 8;49(D1):D1207-D1217
pubmed: 33264411
Clin Biochem. 2008 Oct;41(14-15):1162-7
pubmed: 18692492
J Stat Softw. 2011 Mar;39(5):1-13
pubmed: 27065756
CMAJ. 2012 Aug 7;184(11):1265-9
pubmed: 22371511
PLoS One. 2020 Apr 23;15(4):e0232103
pubmed: 32324812
Atherosclerosis. 2006 Nov;189(1):198-205
pubmed: 16405892
Mutat Res. 2009 Jun 1;665(1-2):1-6
pubmed: 19427504
Am J Epidemiol. 2002 Aug 1;156(3):274-85
pubmed: 12142263
J Stat Softw. 2010;33(1):1-22
pubmed: 20808728
J Biochem Mol Toxicol. 2003;17(1):24-38
pubmed: 12616644
Psychother Res. 2020 Feb;30(2):137-150
pubmed: 30632922
Obes Res Clin Pract. 2013 Sep-Oct;7(5):e330-41
pubmed: 24455761
Curr Cardiol Rep. 2014 Jan;16(1):441
pubmed: 24338557
Food Res Int. 2017 Oct;100(Pt 1):771-779
pubmed: 28873749
Stroke Vasc Neurol. 2017 Jun 21;2(4):230-243
pubmed: 29507784
Surgery. 2016 Jun;159(6):1638-1645
pubmed: 26962006
BMJ. 2009 Jun 04;338:b606
pubmed: 19502216
J Gastroenterol Hepatol. 2006 Jun;21(6):947-57
pubmed: 16724977
BMC Med Genomics. 2012 Jan 06;5:1
pubmed: 22221319
Comput Math Methods Med. 2019 May 28;2019:1891569
pubmed: 31275427
JAMA. 2013 Apr 3;309(13):1351-2
pubmed: 23549579
Diabetes Metab Res Rev. 2020 Feb;36(2):e3230
pubmed: 31654550
Crit Rev Food Sci Nutr. 2012;52(11):999-1023
pubmed: 22823348
Clin Chem. 1997 Jul;43(7):1209-14
pubmed: 9216458
BMC Bioinformatics. 2011 Mar 17;12:77
pubmed: 21414208
J Clin Epidemiol. 2001 Aug;54(8):774-81
pubmed: 11470385
Eur J Clin Nutr. 2011 Dec;65(12):1271-8
pubmed: 21712839
J Clin Epidemiol. 2003 May;56(5):441-7
pubmed: 12812818
Nutr J. 2007 Nov 08;6:39
pubmed: 17996062
Oxid Med Cell Longev. 2013;2013:694014
pubmed: 23844277
IEEE Trans Biomed Eng. 2017 Feb;64(2):263-273
pubmed: 27740470
Exp Biol Med (Maywood). 2018 Feb;243(3):213-221
pubmed: 29405771
J Chromatogr B Analyt Technol Biomed Life Sci. 2002 Jul 25;775(1):121-6
pubmed: 12101069
J Clin Invest. 2004 Dec;114(12):1752-61
pubmed: 15599400
J Nutr Biochem. 2013 Jul;24(7):1183-201
pubmed: 23657158
J Am Med Inform Assoc. 2016 Sep;23(5):1007-15
pubmed: 26911811

Auteurs

Youjin Kim (Y)

Department of Nutritional Science and Food Management, Ewha Womans University, 52 Ewhayeodae-gil, Seodeamun-gu, Seoul 03760, Korea.

Yunsoo Kim (Y)

Department of Nutritional Science and Food Management, Ewha Womans University, 52 Ewhayeodae-gil, Seodeamun-gu, Seoul 03760, Korea.

Jiyoung Hwang (J)

Department of Nutritional Science and Food Management, Graduate Program in System Health Science and Engineering, Ewha Womans University, 52 Ewhayeodae-gil, Seodeamun-gu, Seoul 03760, Korea.

Tim J van den Broek (TJ)

Netherlands Organization for Applied Scientific Research (TNO), Department of Microbiology and Systems Biology, Utrechtseweg 48, 3704 HE Zeist, The Netherlands.

Bumjo Oh (B)

Boramae Medical Center, Department of Family Medicine, Seoul Metropolitan Government-Seoul National University, 20 Boramae-ro 5-gil, Dongjak-gu, Seoul 07061, Korea.

Ji Yeon Kim (JY)

Department of Food Science and Technology, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul 01811, Korea.

Suzan Wopereis (S)

Netherlands Organization for Applied Scientific Research (TNO), Department of Microbiology and Systems Biology, Utrechtseweg 48, 3704 HE Zeist, The Netherlands.

Jildau Bouwman (J)

Netherlands Organization for Applied Scientific Research (TNO), Department of Microbiology and Systems Biology, Utrechtseweg 48, 3704 HE Zeist, The Netherlands.

Oran Kwon (O)

Department of Nutritional Science and Food Management, Ewha Womans University, 52 Ewhayeodae-gil, Seodeamun-gu, Seoul 03760, Korea.
Department of Nutritional Science and Food Management, Graduate Program in System Health Science and Engineering, Ewha Womans University, 52 Ewhayeodae-gil, Seodeamun-gu, Seoul 03760, Korea.

Classifications MeSH