Magic Rings: Navigation in the Ring Chemical Space Guided by the Bioactive Rings.


Journal

Journal of chemical information and modeling
ISSN: 1549-960X
Titre abrégé: J Chem Inf Model
Pays: United States
ID NLM: 101230060

Informations de publication

Date de publication:
09 05 2022
Historique:
pubmed: 28 8 2021
medline: 28 8 2021
entrez: 27 8 2021
Statut: ppublish

Résumé

The large majority of bioactive molecules contain a more or less complex ring system as a central structural element. This central core determines the basic molecule shape, keeps substituents in their proper positions, and often also contributes to the biological activity itself. In this study the ring systems extracted from one billion molecules are processed and differences between rings from bioactive molecules and common synthetic molecules are analyzed. The bioactive rings seem to be distributed throughout the large portion of chemical space, but not uniformly; one can see several more dense regions, where the bioactive rings often appear in small clusters, as well as empty areas. A web tool offering an interactive navigation in the ring chemical space and supporting identification of bioisosteric ring analogs available at https://bit.ly/magicrings is also described.

Identifiants

pubmed: 34445865
doi: 10.1021/acs.jcim.1c00761
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2164-2170

Auteurs

Peter Ertl (P)

Novartis Institutes for BioMedical Research, CH-4056 Basel, Switzerland.

Classifications MeSH