Global molecular diversity of Hepatitis E virus in wild boar and domestic pig.
Genotype
Hepatitis E virus
One health
Pig
Prevalence
Wild boar
Journal
One health (Amsterdam, Netherlands)
ISSN: 2352-7714
Titre abrégé: One Health
Pays: Netherlands
ID NLM: 101660501
Informations de publication
Date de publication:
Dec 2021
Dec 2021
Historique:
received:
11
06
2021
revised:
06
08
2021
accepted:
06
08
2021
entrez:
1
9
2021
pubmed:
2
9
2021
medline:
2
9
2021
Statut:
epublish
Résumé
Our study aim was to describe and characterize the global Hepatitis E virus (HEV) molecular and genotype geographical distribution in domestic pig and wild boar, which could facilitate the traceability of human cases. We performed a systematic sequence search for HEVs identified in domestic pig and wild boar from the available data in GenBank. Only sequences with lengths greater than 300 nt were included. For all sequences, the sequence length, host (i.e., domestic pig or wild boar), country of origin, and HEV genotype/subtype were recorded. Genotypes were assigned by the HEVnet typing tool. The genotype distributions were described by country and host. In countries with sequences available for both species, the genotype coincidences between both animal populations were analyzed. A total of 1404 viral sequences were included: 32.6% from wild boar and 67.4% from domestic pig. Most sequences were consistent with HEV genotype 3 (
Identifiants
pubmed: 34466650
doi: 10.1016/j.onehlt.2021.100304
pii: S2352-7714(21)00094-X
pmc: PMC8385159
doi:
Types de publication
Journal Article
Langues
eng
Pagination
100304Informations de copyright
© 2021 The Author(s).
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