Systematic Review of Approaches to Preserve Machine Learning Performance in the Presence of Temporal Dataset Shift in Clinical Medicine.


Journal

Applied clinical informatics
ISSN: 1869-0327
Titre abrégé: Appl Clin Inform
Pays: Germany
ID NLM: 101537732

Informations de publication

Date de publication:
08 2021
Historique:
entrez: 1 9 2021
pubmed: 2 9 2021
medline: 26 11 2021
Statut: ppublish

Résumé

The change in performance of machine learning models over time as a result of temporal dataset shift is a barrier to machine learning-derived models facilitating decision-making in clinical practice. Our aim was to describe technical procedures used to preserve the performance of machine learning models in the presence of temporal dataset shifts. Studies were included if they were fully published articles that used machine learning and implemented a procedure to mitigate the effects of temporal dataset shift in a clinical setting. We described how dataset shift was measured, the procedures used to preserve model performance, and their effects. Of 4,457 potentially relevant publications identified, 15 were included. The impact of temporal dataset shift was primarily quantified using changes, usually deterioration, in calibration or discrimination. Calibration deterioration was more common ( There was limited research in preserving the performance of machine learning models in the presence of temporal dataset shift in clinical medicine. Future research could focus on the impact of dataset shift on clinical decision making, benchmark the mitigation strategies on a wider range of datasets and tasks, and identify optimal strategies for specific settings.

Identifiants

pubmed: 34470057
doi: 10.1055/s-0041-1735184
pmc: PMC8410238
doi:

Types de publication

Journal Article Systematic Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

808-815

Informations de copyright

Thieme. All rights reserved.

Déclaration de conflit d'intérêts

None declared.

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Auteurs

Lin Lawrence Guo (LL)

Program in Child Health Evaluative Sciences, The Hospital for Sick Children, Toronto, Canada.

Stephen R Pfohl (SR)

Biomedical Informatics Research, Stanford University, Palo Alto, California, United States.

Jason Fries (J)

Biomedical Informatics Research, Stanford University, Palo Alto, California, United States.

Jose Posada (J)

Biomedical Informatics Research, Stanford University, Palo Alto, California, United States.

Scott Lanyon Fleming (SL)

Biomedical Informatics Research, Stanford University, Palo Alto, California, United States.

Catherine Aftandilian (C)

Division of Pediatric Hematology/Oncology, Stanford University, Palo Alto, United States.

Nigam Shah (N)

Biomedical Informatics Research, Stanford University, Palo Alto, California, United States.

Lillian Sung (L)

Program in Child Health Evaluative Sciences, The Hospital for Sick Children, Toronto, Canada.
Division of Haematology/Oncology, The Hospital for Sick Children, Toronto, Canada.

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Classifications MeSH