Machine Learning Identification of Pro-arrhythmic Structures in Cardiac Fibrosis.

arrhythmia cardiac electrophysiology fibrosis machine learning monodomain model neural networks re-entry unidirectional block

Journal

Frontiers in physiology
ISSN: 1664-042X
Titre abrégé: Front Physiol
Pays: Switzerland
ID NLM: 101549006

Informations de publication

Date de publication:
2021
Historique:
received: 14 05 2021
accepted: 30 06 2021
entrez: 6 9 2021
pubmed: 7 9 2021
medline: 7 9 2021
Statut: epublish

Résumé

Cardiac fibrosis and other scarring of the heart, arising from conditions ranging from myocardial infarction to ageing, promotes dangerous arrhythmias by blocking the healthy propagation of cardiac excitation. Owing to the complexity of the dynamics of electrical signalling in the heart, however, the connection between different arrangements of blockage and various arrhythmic consequences remains poorly understood. Where a mechanism defies traditional understanding, machine learning can be invaluable for enabling accurate prediction of quantities of interest (measures of arrhythmic risk) in terms of predictor variables (such as the arrangement or pattern of obstructive scarring). In this study, we simulate the propagation of the action potential (AP) in tissue affected by fibrotic changes and hence detect sites that initiate re-entrant activation patterns. By separately considering multiple different stimulus regimes, we directly observe and quantify the sensitivity of re-entry formation to activation sequence in the fibrotic region. Then, by extracting the fibrotic structures around locations that both do and do not initiate re-entries, we use neural networks to determine to what extent re-entry initiation is predictable, and over what spatial scale conduction heterogeneities appear to act to produce this effect. We find that structural information within about 0.5 mm of a given point is sufficient to predict structures that initiate re-entry with more than 90% accuracy.

Identifiants

pubmed: 34483962
doi: 10.3389/fphys.2021.709485
pmc: PMC8415115
doi:

Types de publication

Journal Article

Langues

eng

Pagination

709485

Informations de copyright

Copyright © 2021 Halfar, Lawson, dos Santos and Burrage.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Cardiovasc Res. 2016 Jun 1;110(3):443-54
pubmed: 27056895
Biophys J. 2011 Sep 21;101(6):1307-15
pubmed: 21943411
PLoS One. 2016 Nov 22;11(11):e0166972
pubmed: 27875591
J Theor Biol. 2008 Aug 7;253(3):544-60
pubmed: 18495166
Adv Drug Deliv Rev. 2019 Jun;146:77-82
pubmed: 31158407
Circ Res. 1990 Feb;66(2):367-82
pubmed: 2297808
Sci Rep. 2018 Nov 6;8(1):16392
pubmed: 30401912
Sci Rep. 2016 Feb 10;6:20835
pubmed: 26861111
Circ Res. 1985 Sep;57(3):432-42
pubmed: 4028346
Heart Rhythm. 2012 Aug;9(8):1331-4
pubmed: 22133632
Heart Rhythm. 2016 Jul;13(7):1536-43
pubmed: 26976038
Philos Trans A Math Phys Eng Sci. 2020 Jun 12;378(2173):20190341
pubmed: 32448068
Sci Rep. 2020 Jan 21;10(1):764
pubmed: 31964904
J Cardiovasc Pharmacol. 2011 Jun;57(6):630-8
pubmed: 21150449
Front Physiol. 2018 Aug 07;9:1052
pubmed: 30131713
J Mol Cell Cardiol. 2014 May;70:83-91
pubmed: 24184999
Int J Numer Method Biomed Eng. 2012 Aug;28(8):890-903
pubmed: 25099569
Eur Heart J. 2015 Sep 14;36(35):2390-401
pubmed: 26059724
Europace. 2007 Nov;9 Suppl 6:vi38-45
pubmed: 17959692
PLoS One. 2015 Feb 18;10(2):e0117110
pubmed: 25692857
Biomed Res Int. 2015;2015:713058
pubmed: 26583127
Am J Physiol Heart Circ Physiol. 2014 May;306(9):H1341-52
pubmed: 24610922
Circ Arrhythm Electrophysiol. 2020 Jul;13(7):e008213
pubmed: 32536204
Heart Rhythm. 2009 Jun;6(6):803-10
pubmed: 19467508
Heart Rhythm. 2020 Apr;17(4):576-583
pubmed: 31751771
Front Physiol. 2021 May 26;12:674106
pubmed: 34122144
J Electrocardiol. 2019 Nov - Dec;57S:S61-S64
pubmed: 31521378
Biophys J. 2010 Sep 8;99(5):1408-15
pubmed: 20816052
IEEE Trans Biomed Eng. 2018 Jul;65(7):1662-1671
pubmed: 28952932
Front Physiol. 2018 Jun 22;9:764
pubmed: 29988469
Heart Rhythm. 2007 Dec;4(12):1553-62
pubmed: 18068635
Cardiovasc Res. 1997 Aug;35(2):256-72
pubmed: 9349389
JACC Clin Electrophysiol. 2018 Jan;4(1):1-16
pubmed: 29600773
PLoS Comput Biol. 2020 Sep 23;16(9):e1008086
pubmed: 32966275

Auteurs

Radek Halfar (R)

IT4Innovations, VSB-Technical University of Ostrava, Ostrava, Czechia.

Brodie A J Lawson (BAJ)

Centre for Data Science, School of Mathematical Sciences, Queensland University of Technology, Brisbane, QLD, Australia.
ARC Centre of Excellence for Mathematical and Statistical Frontiers, School of Mathematical Sciences, Queensland University of Technology, Brisbane, QLD, Australia.

Rodrigo Weber Dos Santos (RW)

Graduate Program in Computational Modeling, Universidade Federal de Juiz de Fora, Juiz de Fora, Brazil.

Kevin Burrage (K)

ARC Centre of Excellence for Mathematical and Statistical Frontiers, School of Mathematical Sciences, Queensland University of Technology, Brisbane, QLD, Australia.
Department of Computer Science, University of Oxford, Oxford, United Kingdom.

Classifications MeSH