Dissecting Monomer-Dimer Equilibrium of an RNase P Protein Provides Insight Into the Synergistic Flexibility of 5' Leader Pre-tRNA Recognition.

RNA binding diffusion coefficient folding ribonuclease P solution NMR substrate recognition tRNA processing

Journal

Frontiers in molecular biosciences
ISSN: 2296-889X
Titre abrégé: Front Mol Biosci
Pays: Switzerland
ID NLM: 101653173

Informations de publication

Date de publication:
2021
Historique:
received: 24 06 2021
accepted: 18 08 2021
entrez: 20 9 2021
pubmed: 21 9 2021
medline: 21 9 2021
Statut: epublish

Résumé

Ribonuclease P (RNase P) is a universal RNA-protein endonuclease that catalyzes 5' precursor-tRNA (ptRNA) processing. The RNase P RNA plays the catalytic role in ptRNA processing; however, the RNase P protein is required for catalysis

Identifiants

pubmed: 34540901
doi: 10.3389/fmolb.2021.730274
pii: 730274
pmc: PMC8447495
doi:

Types de publication

Journal Article

Langues

eng

Pagination

730274

Subventions

Organisme : NIGMS NIH HHS
ID : R01 GM120572
Pays : United States
Organisme : NIH HHS
ID : S10 OD025000
Pays : United States
Organisme : NIGMS NIH HHS
ID : T32 GM007347
Pays : United States

Informations de copyright

Copyright © 2021 Zeng, Abzhanova, Brown and Reiter.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Nucleic Acids Res. 2019 Jul 9;47(12):6425-6438
pubmed: 30997498
RNA. 2003 Jun;9(6):734-45
pubmed: 12756331
J Mol Graph. 1996 Feb;14(1):51-5, 29-32
pubmed: 8744573
Biomolecules. 2016 May 13;6(2):
pubmed: 27187488
Cell Chem Biol. 2016 Oct 20;23(10):1271-1281
pubmed: 27693057
Science. 1998 May 1;280(5364):752-5
pubmed: 9563955
Nat Commun. 2020 Aug 27;11(1):4305
pubmed: 32855391
RNA. 2010 Sep;16(9):1725-47
pubmed: 20627997
Biochemistry. 2017 Jan 10;56(1):3-13
pubmed: 27935277
Biochemistry. 1998 Jun 30;37(26):9409-16
pubmed: 9649323
Wiley Interdiscip Rev RNA. 2013 Sep-Oct;4(5):507-22
pubmed: 23754657
Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):20881-90
pubmed: 22065782
Science. 2004 Oct 1;306(5693):104-7
pubmed: 15459389
Cell. 1983 Dec;35(3 Pt 2):849-57
pubmed: 6197186
Cell. 2018 Nov 15;175(5):1393-1404.e11
pubmed: 30454648
Nat Rev Microbiol. 2006 Oct;4(10):729-40
pubmed: 16980936
J Biomol NMR. 1994 Sep;4(5):603-14
pubmed: 22911360
Biochemistry. 1998 Feb 24;37(8):2393-400
pubmed: 9485387
Proc Natl Acad Sci U S A. 1998 Dec 22;95(26):15212-7
pubmed: 9860948
Nucleic Acids Res. 2001 Feb 15;29(4):880-5
pubmed: 11160919
Annu Rev Biophys. 2013;42:537-57
pubmed: 23654306
Biomolecules. 2016 Apr 01;6(2):
pubmed: 27043647
Biophys J. 2011 Aug 17;101(4):892-8
pubmed: 21843480
Nature. 2010 Dec 9;468(7325):784-9
pubmed: 21076397
Biochimie. 2007 Oct;89(10):1183-94
pubmed: 17624654
RNA. 2011 Jul;17(7):1225-35
pubmed: 21622899
Biochemistry. 2007 Dec 25;46(51):15062-75
pubmed: 18052200
Nucleic Acids Res. 1993 Jan 11;21(1):51-7
pubmed: 7680114
J Biomol NMR. 1995 Nov;6(3):277-93
pubmed: 8520220
J Cell Biol. 2017 Aug 7;216(8):2391-2407
pubmed: 28637748
Biomol NMR Assign. 2018 Apr;12(1):183-187
pubmed: 29450823
Biochemistry. 2014 Oct 21;53(41):6439-51
pubmed: 25263959
Biochemistry. 2002 Jul 30;41(30):9545-58
pubmed: 12135377
RNA. 2007 Feb;13(2):251-66
pubmed: 17194721
Biochemistry. 1994 Feb 15;33(6):1399-405
pubmed: 8312258
RNA. 2007 Apr;13(4):521-35
pubmed: 17299131
J Biomol NMR. 2013 Jul;56(3):227-41
pubmed: 23728592
RNA. 2001 Feb;7(2):233-41
pubmed: 11233980
Nature. 2003 Feb 13;421(6924):760-4
pubmed: 12610630
Nature. 2005 Sep 22;437(7058):584-7
pubmed: 16113684
Hum Mol Genet. 2010 Apr 15;19(R1):R46-64
pubmed: 20400460
J Mol Biol. 1991 Sep 5;221(1):1-5
pubmed: 1717693
Acta Crystallogr F Struct Biol Commun. 2018 Oct 1;74(Pt 10):632-637
pubmed: 30279314
J Mol Biol. 2011 Aug 12;411(2):368-83
pubmed: 21683084
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
pubmed: 15572765
J Biol Chem. 2020 Feb 21;295(8):2313-2323
pubmed: 31953324
Nat Commun. 2019 Jun 13;10(1):2617
pubmed: 31197137
Biochemistry. 2002 Oct 29;41(43):12986-94
pubmed: 12390025
Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13392-7
pubmed: 16157868
RNA. 2020 Oct;26(10):1400-1413
pubmed: 32518066
Biochemistry. 1989 Nov 14;28(23):8972-9
pubmed: 2690953
J Mol Biol. 2000 Jan 7;295(1):105-15
pubmed: 10623511
RNA. 2006 Aug;12(8):1463-7
pubmed: 16822954
EMBO J. 2005 Oct 5;24(19):3360-8
pubmed: 16163391
J Mol Biol. 2010 Feb 5;395(5):1019-37
pubmed: 19917291
Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7497-502
pubmed: 12799461
J Mol Biol. 2010 Feb 12;396(1):195-208
pubmed: 19932118
J Mol Biol. 2002 Nov 29;324(3):429-42
pubmed: 12445779
RNA. 2017 Oct;23(10):1502-1511
pubmed: 28694328
Science. 2018 Nov 9;362(6415):
pubmed: 30262633
J Biomol NMR. 2007 Dec;39(4):275-89
pubmed: 17955183
J Magn Reson. 2000 Nov;147(1):138-46
pubmed: 11042057
J Biomol NMR. 1995 Sep;6(2):135-40
pubmed: 8589602
Proc Natl Acad Sci U S A. 2008 Mar 25;105(12):4685-90
pubmed: 18326625
Curr Opin Struct Biol. 2006 Jun;16(3):327-35
pubmed: 16650980
RNA. 2000 Sep;6(9):1212-25
pubmed: 10999599
Nat Struct Mol Biol. 2005 Nov;12(11):958-64
pubmed: 16228004
RNA. 2004 Mar;10(3):482-92
pubmed: 14970393
Nucleic Acids Res. 2012 Nov 1;40(20):10384-93
pubmed: 22904083
EMBO J. 2006 Sep 6;25(17):3998-4007
pubmed: 16932744
J Am Chem Soc. 2003 Feb 19;125(7):1731-7
pubmed: 12580598
Acta Crystallogr D Biol Crystallogr. 2002 Jul;58(Pt 7):1234-6
pubmed: 12077454
Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2479-84
pubmed: 20133747

Auteurs

Danyun Zeng (D)

Department of Chemistry, Marquette University, Milwaukee, WI, United States.

Ainur Abzhanova (A)

Department of Chemistry, Marquette University, Milwaukee, WI, United States.

Benjamin P Brown (BP)

Chemical and Physical Biology Program, Medical Scientist Training Program, Vanderbilt University, Nashville, TN, United States.
Center for Structural Biology, Vanderbilt University School of Medicine, Nashville, TN, United States.

Nicholas J Reiter (NJ)

Department of Chemistry, Marquette University, Milwaukee, WI, United States.

Classifications MeSH