Tandem duplicate expression patterns are conserved between maize haplotypes of the
copy number variation
gene duplication
maize
opaque2
zein
Journal
Plant direct
ISSN: 2475-4455
Titre abrégé: Plant Direct
Pays: England
ID NLM: 101716131
Informations de publication
Date de publication:
Sep 2021
Sep 2021
Historique:
received:
25
03
2021
revised:
12
07
2021
accepted:
05
08
2021
entrez:
20
9
2021
pubmed:
21
9
2021
medline:
21
9
2021
Statut:
epublish
Résumé
Tandem duplication gives rise to copy number variation and subsequent functional novelty among genes as well as diversity between individuals in a species. Functional novelty can result from either divergence in coding sequence or divergence in patterns of gene transcriptional regulation. Here, we investigate conservation and divergence of both gene sequence and gene regulation between the copies of the
Identifiants
pubmed: 34541444
doi: 10.1002/pld3.346
pii: PLD3346
pmc: PMC8438537
doi:
Types de publication
Journal Article
Langues
eng
Pagination
e346Informations de copyright
© 2021 The Authors. Plant Direct published by American Society of Plant Biologists and the Society for Experimental Biology and John Wiley & Sons Ltd.
Déclaration de conflit d'intérêts
The Authors did not report any conflict of interest.
Références
Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):12810-5
pubmed: 20615951
Proc Natl Acad Sci U S A. 2016 May 3;113(18):4964-9
pubmed: 27092004
Theor Appl Genet. 2020 May;133(5):1443-1453
pubmed: 31897513
Genetics. 2011 Dec;189(4):1271-80
pubmed: 21926304
Nat Biotechnol. 2019 Aug;37(8):907-915
pubmed: 31375807
Nat Rev Genet. 2008 Dec;9(12):938-50
pubmed: 19015656
Plant Physiol. 1990 Jan;92(1):191-6
pubmed: 16667246
Genome Res. 2001 Nov;11(11):1817-25
pubmed: 11691845
Genome Biol. 2019 Dec 16;20(1):278
pubmed: 31842956
Commun Biol. 2019 Dec 10;2:460
pubmed: 31840105
PLoS Genet. 2011 Jun;7(6):e1002131
pubmed: 21731501
Theor Appl Genet. 2011 Mar;122(4):783-94
pubmed: 21076810
Plant Mol Biol. 2009 Apr;69(6):649-59
pubmed: 19112555
Genome Res. 2004 Oct;14(10A):1932-7
pubmed: 15466291
Proc Natl Acad Sci U S A. 2010 Jan 19;107(3):1029-34
pubmed: 20018685
Science. 2009 Nov 20;326(5956):1112-5
pubmed: 19965430
Nature. 2017 Jun 22;546(7659):524-527
pubmed: 28605751
Plant Cell. 2018 Oct;30(10):2402-2424
pubmed: 30242039
Genome Biol. 2014;15(12):550
pubmed: 25516281
G3 (Bethesda). 2018 Aug 30;8(9):3049-3058
pubmed: 30030405
Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):7949-56
pubmed: 27354512
J Exp Bot. 2010 Aug;61(13):3663-73
pubmed: 20558569
Gene. 2012 Mar 15;496(1):1-7
pubmed: 22285376
PLoS Genet. 2016 Apr 14;12(4):e1005991
pubmed: 27077660
Proc Natl Acad Sci U S A. 2003 Jul 22;100(15):9055-60
pubmed: 12853580
Plant Cell. 2015 Apr;27(4):1162-72
pubmed: 25901087
Front Plant Sci. 2014 Jun 20;5:276
pubmed: 24999346
Genome Biol. 2020 May 20;21(1):121
pubmed: 32434565
Plant Physiol. 2002 Dec;130(4):1626-35
pubmed: 12481046
Genetics. 2008 Jan;178(1):539-51
pubmed: 18202393
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Annu Rev Plant Biol. 2009;60:433-53
pubmed: 19575588
Plant Cell. 2007 Aug;19(8):2569-82
pubmed: 17693529
Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15682-7
pubmed: 14671323
Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7685-90
pubmed: 9207153
Mol Plant. 2008 Sep;1(5):760-9
pubmed: 19825579
PLoS Genet. 2016 Aug 19;12(8):e1006270
pubmed: 27541862
Bioinformatics. 2014 Apr 1;30(7):1006-7
pubmed: 24351709
Plant Cell. 1991 Nov;3(11):1207-19
pubmed: 1821766
Proc Natl Acad Sci U S A. 1990 Jan;87(1):46-50
pubmed: 2296602
Theor Appl Genet. 2008 Jul;117(2):157-70
pubmed: 18427771
Science. 1964 Jul 17;145(3629):279-80
pubmed: 14171571
Nat Genet. 2018 Sep;50(9):1282-1288
pubmed: 30061736
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147