Self-supervised representation learning for surgical activity recognition.

Deep Learning Probabilistic modeling Representation Learning Self-supervised Learning Surgical Activity Recognition Unsupervised Learning

Journal

International journal of computer assisted radiology and surgery
ISSN: 1861-6429
Titre abrégé: Int J Comput Assist Radiol Surg
Pays: Germany
ID NLM: 101499225

Informations de publication

Date de publication:
Nov 2021
Historique:
received: 25 01 2021
accepted: 03 09 2021
pubmed: 21 9 2021
medline: 17 11 2021
entrez: 20 9 2021
Statut: ppublish

Résumé

Virtual reality-based simulators have the potential to become an essential part of surgical education. To make full use of this potential, they must be able to automatically recognize activities performed by users and assess those. Since annotations of trajectories by human experts are expensive, there is a need for methods that can learn to recognize surgical activities in a data-efficient way. We use self-supervised training of deep encoder-decoder architectures to learn representations of surgical trajectories from video data. These representations allow for semi-automatic extraction of features that capture information about semantically important events in the trajectories. Such features are processed as inputs of an unsupervised surgical activity recognition pipeline. Our experiments document that the performance of hidden semi-Markov models used for recognizing activities in a simulated myomectomy scenario benefits from using features extracted from representations learned while training a deep encoder-decoder network on the task of predicting the remaining surgery progress. Our work is an important first step in the direction of making efficient use of features obtained from deep representation learning for surgical activity recognition in settings where only a small fraction of the existing data is annotated by human domain experts and where those annotations are potentially incomplete.

Identifiants

pubmed: 34542839
doi: 10.1007/s11548-021-02493-z
pii: 10.1007/s11548-021-02493-z
pmc: PMC8589823
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2037-2044

Informations de copyright

© 2021. The Author(s).

Références

Int J Comput Assist Radiol Surg. 2019 Nov;14(11):2005-2020
pubmed: 31037493
Surg Endosc. 2010 Jan;24(1):79-88
pubmed: 19551434
PLoS Comput Biol. 2019 Sep 3;15(9):e1007348
pubmed: 31479439
IEEE Trans Med Imaging. 2019 Apr;38(4):1069-1078
pubmed: 30371356
Med Teach. 2018 Jul;40(7):668-675
pubmed: 29911477
IEEE Trans Biomed Eng. 2017 Sep;64(9):2025-2041
pubmed: 28060703

Auteurs

Daniel Paysan (D)

Department of Computer Science, ETH Zurich, Zurich, Switzerland. paysand@ethz.ch.

Luis Haug (L)

Department of Computer Science, ETH Zurich, Zurich, Switzerland.

Michael Bajka (M)

Division of Gynecology Department OB/GYN, University Hospital, Zurich, Switzerland.

Markus Oelhafen (M)

VirtaMed AG, Schlieren, Switzerland.

Joachim M Buhmann (JM)

Department of Computer Science, ETH Zurich, Zurich, Switzerland.

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Classifications MeSH