Biochemical Characterization of a Novel Redox-Regulated Metacaspase in a Marine Diatom.

Phaeodactylum tricornutum diatom infochemicals metacaspase phytoplankton programmed cell death reactive oxygen species redox-regulation

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2021
Historique:
received: 30 03 2021
accepted: 16 08 2021
entrez: 27 9 2021
pubmed: 28 9 2021
medline: 28 9 2021
Statut: epublish

Résumé

Programmed cell death (PCD) in marine microalgae was suggested to be one of the mechanisms that facilitates bloom demise, yet its molecular components in phytoplankton are unknown. Phytoplankton are completely lacking any of the canonical components of PCD, such as caspases, but possess metacaspases. Metacaspases were shown to regulate PCD in plants and some protists, but their roles in algae and other organisms are still elusive. Here, we identified and biochemically characterized a type III metacaspase from the model diatom

Identifiants

pubmed: 34566902
doi: 10.3389/fmicb.2021.688199
pmc: PMC8455989
doi:

Types de publication

Journal Article

Langues

eng

Pagination

688199

Informations de copyright

Copyright © 2021 Graff van Creveld, Ben-Dor, Mizrachi, Alcolombri, Hopes, Mock, Rosenwasser and Vardi.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

PLoS One. 2011 Feb 18;6(2):e16765
pubmed: 21364738
Proc Natl Acad Sci U S A. 2014 Jun 17;111(24):9009-14
pubmed: 24889616
J Biol Chem. 2005 Apr 15;280(15):14691-9
pubmed: 15691845
Phytochemistry. 2007 Aug;68(15):2059-67
pubmed: 17575990
Annu Rev Plant Biol. 2002;53:109-30
pubmed: 12221969
Trends Plant Sci. 2015 Feb;20(2):102-13
pubmed: 25457111
Proc Natl Acad Sci U S A. 2015 Apr 28;112(17):E2182-90
pubmed: 25870299
Curr Biol. 2008 Jun 24;18(12):895-9
pubmed: 18538570
Cell Death Dis. 2013 Feb 14;4:e490
pubmed: 23412383
Curr Biol. 1999 Sep 23;9(18):1061-4
pubmed: 10508616
ISME J. 2015 Feb;9(2):385-95
pubmed: 25083933
Nat Commun. 2017 Nov 3;8(1):1292
pubmed: 29101388
Methods Mol Biol. 2014;1133:203-21
pubmed: 24567104
Eukaryot Cell. 2008 Feb;7(2):223-36
pubmed: 18039944
EMBO J. 2017 Jun 1;36(11):1559-1576
pubmed: 28420744
Cell Death Differ. 2011 Aug;18(8):1279-88
pubmed: 21597462
Annu Rev Plant Biol. 2017 Apr 28;68:375-404
pubmed: 28125285
New Phytol. 2018 May;218(3):1179-1191
pubmed: 28643870
PLoS One. 2012;7(2):e31750
pubmed: 22363721
J Biol Chem. 2007 Jan 12;282(2):1352-8
pubmed: 17110382
Mol Microbiol. 2017 Dec;106(5):815-831
pubmed: 28941233
Mar Genomics. 2015 Dec;24 Pt 1:81-8
pubmed: 26118837
Bioinformatics. 2008 Feb 15;24(4):498-504
pubmed: 18203772
Angew Chem Int Ed Engl. 2013 Jan 14;52(3):854-7
pubmed: 23315901
FEBS Lett. 2007 Dec 11;581(29):5635-9
pubmed: 18005666
J Cell Sci. 2002 Nov 1;115(Pt 21):4061-9
pubmed: 12356911
Trends Plant Sci. 2011 Jun;16(6):300-9
pubmed: 21482172
J Cell Biol. 2007 Nov 5;179(3):375-80
pubmed: 17967946
Front Plant Sci. 2019 Jun 04;10:704
pubmed: 31214222
Cell Death Differ. 2014 Sep;21(9):1399-408
pubmed: 24786830
Nat Rev Mol Cell Biol. 2003 Oct;4(10):798-807
pubmed: 14570057
Curr Biol. 2016 Jul 11;26(13):R594-R607
pubmed: 27404255
Proc Natl Acad Sci U S A. 2015 Aug 11;112(32):9938-43
pubmed: 26221022
Trends Plant Sci. 2000 Jun;5(6):241-6
pubmed: 10838614
Nat Commun. 2018 Jan 22;9(1):324
pubmed: 29358734
Sci Rep. 2016 Apr 25;6:24951
pubmed: 27108533
Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2740-5
pubmed: 24550302
Methods Mol Biol. 2014;1133:237-53
pubmed: 24567106
Mol Cell. 2000 Oct;6(4):961-7
pubmed: 11090634
Methods Mol Biol. 2014;1133:189-202
pubmed: 24567103
Nat Biotechnol. 2014 Dec;32(12):1262-7
pubmed: 25184501
Plant Methods. 2016 Nov 24;12:49
pubmed: 27904648
Proc Natl Acad Sci U S A. 2010 Jul 27;107(30):13348-53
pubmed: 20624963
Plant Cell. 2017 Aug;29(8):2047-2070
pubmed: 28765511
PLoS Biol. 2014 Jun 24;12(6):e1001889
pubmed: 24959919
Gene. 2018 Apr 20;651:70-78
pubmed: 29408405
Appl Environ Microbiol. 2004 Feb;70(2):704-11
pubmed: 14766545
Protoplasma. 2018 Jan;255(1):387-397
pubmed: 28744694
Science. 2000 Jun 30;288(5475):2363-6
pubmed: 10875921
Biol Open. 2016 Jan 06;5(2):122-9
pubmed: 26740571
Ann Rev Mar Sci. 2015;7:341-75
pubmed: 25251265
Nat Biotechnol. 2013 Aug;31(8):691-3
pubmed: 23929340
Curr Biol. 2016 Jul 11;26(13):R587-R593
pubmed: 27404254
Plant Cell Environ. 2012 Feb;35(2):259-70
pubmed: 21486305
Bio Protoc. 2017 Dec 05;7(23):e2625
pubmed: 34595293
Proc Natl Acad Sci U S A. 2012 May 8;109(19):7469-74
pubmed: 22529389
Cell Death Differ. 2007 Jan;14(1):32-43
pubmed: 17082813
PLoS Biol. 2006 Mar;4(3):e60
pubmed: 16475869
Angew Chem Int Ed Engl. 2000 Dec 1;39(23):4352-4354
pubmed: 29711885
J Phycol. 2018 Jun;54(3):329-341
pubmed: 29505088
Plant Physiol. 2016 Oct;172(2):968-979
pubmed: 27503604
Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20633-8
pubmed: 24248337
Cell Death Differ. 2017 Aug;24(8):1314-1325
pubmed: 28234356
Mol Cell. 2020 Mar 5;77(5):927-929
pubmed: 32142688
Nat Rev Mol Cell Biol. 2007 Oct;8(10):813-24
pubmed: 17848967
PLoS Genet. 2016 Dec 14;12(12):e1006490
pubmed: 27973599
Biotechnol Biofuels. 2012 Jun 06;5(1):40
pubmed: 22672912
Gene. 2007 Dec 30;406(1-2):23-35
pubmed: 17658702
Plant Physiol. 2016 Jul;171(3):1541-50
pubmed: 27255485
Plant J. 2018 Dec;96(5):921-936
pubmed: 30176090
PLoS One. 2017 Jun 5;12(6):e0178761
pubmed: 28582415
Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2412-7
pubmed: 22308324
Protein Sci. 2008 Mar;17(3):473-81
pubmed: 18287280
Environ Microbiol. 2012 Jan;14(1):67-81
pubmed: 21453404
J Biol Chem. 2011 Mar 25;286(12):10027-40
pubmed: 21209078
Elife. 2019 Jun 24;8:
pubmed: 31232691
J Biol Chem. 2012 Aug 24;287(35):29251-9
pubmed: 22761449
Nat Plants. 2017 May 15;3:17066
pubmed: 28504699
Science. 2010 Dec 3;330(6009):1393-7
pubmed: 21097903
Environ Microbiol. 2009 Sep;11(9):2301-9
pubmed: 19508337
Nature. 2004 May 27;429(6990):403-7
pubmed: 15164060

Auteurs

Shiri Graff van Creveld (S)

Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
School of Oceanography, University of Washington, Seattle, WA, United States.

Shifra Ben-Dor (S)

Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.

Avia Mizrachi (A)

Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.

Uria Alcolombri (U)

Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Department of Civil, Environmental and Geomatic Engineering, Institute for Environmental Engineering, Swiss Federal Institute of Technology, Zurich, Switzerland.

Amanda Hopes (A)

School of Environmental Sciences, University of East Anglia, Norwich, United Kingdom.

Thomas Mock (T)

School of Environmental Sciences, University of East Anglia, Norwich, United Kingdom.

Shilo Rosenwasser (S)

Robert H. Smith Faculty of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Jerusalem, Israel.

Assaf Vardi (A)

Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.

Classifications MeSH