Comparison of Three Real-Time PCR Assays Targeting the SSU rRNA Gene, the COWP Gene and the DnaJ-Like Protein Gene for the Diagnosis of
Cryptosporidium spp.
diagnostic accuracy
latent class analysis
real-time PCR
sensitivity
specificity
test comparison
Journal
Pathogens (Basel, Switzerland)
ISSN: 2076-0817
Titre abrégé: Pathogens
Pays: Switzerland
ID NLM: 101596317
Informations de publication
Date de publication:
02 Sep 2021
02 Sep 2021
Historique:
received:
14
08
2021
revised:
29
08
2021
accepted:
02
09
2021
entrez:
28
9
2021
pubmed:
29
9
2021
medline:
29
9
2021
Statut:
epublish
Résumé
As qualified microscopy of enteric parasitoses as defined by high diagnostic accuracy is difficult to maintain in non-endemic areas due to scarce opportunities for practicing with positive sample materials, molecular diagnostic options provide less investigator-dependent alternatives. Here, we compared three molecular targets for the real-time PCR-based detection of
Identifiants
pubmed: 34578163
pii: pathogens10091131
doi: 10.3390/pathogens10091131
pmc: PMC8472038
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : Bundesministerium der Verteidigung
ID : 36K2-S-45 1922
Références
J Parasitol Res. 2017;2017:6205257
pubmed: 29181192
Am J Trop Med Hyg. 2011 Feb;84(2):332-7
pubmed: 21292910
Gut Pathog. 2020 May 29;12:27
pubmed: 32514315
Clin Microbiol Rev. 2013 Jan;26(1):115-34
pubmed: 23297262
J Microbiol Methods. 2015 Mar;110:78-84
pubmed: 25615719
Clin Microbiol Infect. 2007 Oct;13(10):1001-7
pubmed: 17714523
J Microbiol Methods. 2001 Dec;47(3):323-37
pubmed: 11714523
Int J Infect Dis. 2020 Oct;99:414-420
pubmed: 32800862
Front Microbiol. 2017 Jun 29;8:1210
pubmed: 28706515
PLoS One. 2016 Nov 18;11(11):e0166957
pubmed: 27861635
J Clin Microbiol. 2011 Jan;49(1):257-62
pubmed: 21048004
J Med Microbiol. 2006 Sep;55(Pt 9):1217-1222
pubmed: 16914651
Int J STD AIDS. 1996;7 Suppl 1:28-33
pubmed: 8652725
Trop Biomed. 2017 Dec 1;34(4):895-902
pubmed: 33592959
Diagn Microbiol Infect Dis. 2019 Sep;95(1):34-37
pubmed: 31079868
Am J Trop Med Hyg. 2018 Dec;99(6):1613-1618
pubmed: 30398140
Microorganisms. 2020 Sep 22;8(9):
pubmed: 32971858
J Microbiol Methods. 2020 Dec;179:106102
pubmed: 33188802
Korean J Parasitol. 2018 Oct;56(5):419-427
pubmed: 30419727
Methods Mol Biol. 2020;2052:11-22
pubmed: 31452154
PLoS One. 2019 Apr 8;14(4):e0215068
pubmed: 30958837
Am J Trop Med Hyg. 2020 Jul;103(1):421-427
pubmed: 32458774
Appl Environ Microbiol. 2006 Jun;72(6):4484-8
pubmed: 16751574
Microorganisms. 2021 Feb 02;9(2):
pubmed: 33540520
J Med Microbiol. 2008 Sep;57(Pt 9):1099-1105
pubmed: 18719179
J Appl Microbiol. 2013 Apr;114(4):1211-22
pubmed: 23230846
Biometrics. 1996 Sep;52(3):797-810
pubmed: 8805757
Am J Trop Med Hyg. 2019 Jul;101(1):160-163
pubmed: 31115293
Int J Circumpolar Health. 2013;72:19903
pubmed: 23570023
Folia Biol (Krakow). 2011;59(3-4):115-20
pubmed: 22195463
Clin Microbiol Rev. 2014 Apr;27(2):371-418
pubmed: 24696439
Clin Chem Lab Med. 2018 Sep 25;56(10):1722-1727
pubmed: 29451859
Infect Dis (Lond). 2020 Feb;52(2):87-96
pubmed: 31656115
Am J Trop Med Hyg. 2015 Aug;93(2):257-62
pubmed: 26101274
Mol Cell Probes. 2012 Apr;26(2):104-6
pubmed: 22227113
Appl Environ Microbiol. 2003 Sep;69(9):5178-85
pubmed: 12957899
Mil Med. 2011 Oct;176(10):1096-100
pubmed: 22128641
Pathogens. 2021 May 26;10(6):
pubmed: 34073403
Lett Appl Microbiol. 2004;38(3):217-22
pubmed: 14962043
FEMS Microbiol Lett. 2002 Aug 27;214(1):13-7
pubmed: 12204366
Parasit Vectors. 2019 Dec 19;12(1):596
pubmed: 31856894
Rev Inst Med Trop Sao Paulo. 2019 Jun 19;61:e28
pubmed: 31241657
Eur J Clin Microbiol Infect Dis. 2009 Sep;28(9):1045-53
pubmed: 19415354
Crit Rev Microbiol. 1988;16(2):113-59
pubmed: 3067976
Acta Trop. 2017 Mar;167:64-70
pubmed: 28007484
Clin Microbiol Infect. 2014 Mar;20(3):O182-7
pubmed: 24131399
Eur J Microbiol Immunol (Bp). 2015 Mar;5(1):94-102
pubmed: 25883797
Biochem Biophys Res Commun. 2013 Jun 28;436(2):134-9
pubmed: 23727382
J Clin Microbiol. 2004 Mar;42(3):1220-3
pubmed: 15004079
J Clin Microbiol. 2013 Aug;51(8):2556-63
pubmed: 23720792
Infect Dis (Lond). 2017 Sep;49(9):655-663
pubmed: 28446068
Biomed Res Int. 2015;2015:573904
pubmed: 26525953
Indian J Med Microbiol. 2020 Jul-Dec;38(3 & 4):430-439
pubmed: 33154258
Clin Microbiol Infect. 2010 Mar;16(3):267-73
pubmed: 19456836
Pathogens. 2021 Feb 09;10(2):
pubmed: 33572338
J Clin Microbiol. 2002 Sep;40(9):3237-44
pubmed: 12202559
Am J Trop Med Hyg. 1991 Dec;45(6):688-94
pubmed: 1763795
Parasitol Res. 2016 Jul;115(7):2873-7
pubmed: 27095569
Am J Trop Med Hyg. 2007 May;76(5):938-42
pubmed: 17488919
Lancet Infect Dis. 2021 May;21(5):722-730
pubmed: 33278916
Clin Microbiol Infect. 2019 Dec;25(12):1510-1516
pubmed: 31226445
Clin Microbiol Infect. 2016 Feb;22(2):190.e1-190.e8
pubmed: 26548509
J Med Microbiol. 2003 Aug;52(Pt 8):681-683
pubmed: 12867562
Am J Trop Med Hyg. 2007 Apr;76(4):713-7
pubmed: 17426176
J R Army Med Corps. 2014 Dec;160(4):289-94
pubmed: 24302120
Eur J Microbiol Immunol (Bp). 2013 Mar;3(1):53-60
pubmed: 24265919
Clin Microbiol Infect. 2009 Sep;15(9):869-74
pubmed: 19624500
Parasitol Res. 2018 Feb;117(2):447-451
pubmed: 29260297
Methods. 2001 Dec;25(4):419-29
pubmed: 11846611
Parasitol Res. 2013 Apr;112(4):1641-6
pubmed: 23411740
Am J Trop Med Hyg. 2013 Jun;88(6):1041-7
pubmed: 23509117
Korean J Parasitol. 2013 Jun;51(3):353-5
pubmed: 23864748
J Clin Pathol. 2020 Nov;73(11):758-761
pubmed: 32409597
J Clin Microbiol. 2011 Mar;49(3):918-24
pubmed: 21177904
Clin Microbiol Infect. 2014 Jun;20(6):545-50
pubmed: 24131443
Acta Trop. 2020 May;205:105377
pubmed: 32007448
J Med Microbiol. 2011 Nov;60(Pt 11):1598-1604
pubmed: 21757501
Parasitol Res. 2013 Feb;112(2):595-601
pubmed: 23114927
Clin Infect Dis. 2015 Nov 15;61(10):1615-23
pubmed: 26195015
J Clin Microbiol. 2016 Nov;54(11):2681-2688
pubmed: 27535690
J Clin Microbiol. 2013 Feb;51(2):472-80
pubmed: 23175269
Travel Med Infect Dis. 2021 May-Jun;41:102042
pubmed: 33812018
FEMS Microbiol Lett. 2003 Sep 26;226(2):237-43
pubmed: 14553917
Lett Appl Microbiol. 2021 Jun;72(6):774-782
pubmed: 33544912
Pathogens. 2021 Aug 19;10(8):
pubmed: 34451517
Mol Biochem Parasitol. 2003 Aug 11;130(1):13-22
pubmed: 14550892
Acta Trop. 2016 Oct;162:233-238
pubmed: 27423396
J Clin Microbiol. 2014 Mar;52(3):916-23
pubmed: 24403298
Exp Parasitol. 2017 Jan;172:61-67
pubmed: 27998735
Vector Borne Zoonotic Dis. 2021 Mar;21(3):179-190
pubmed: 33259769
Biometrics. 1977 Mar;33(1):159-74
pubmed: 843571
Parasitol Res. 2018 Mar;117(3):875-881
pubmed: 29411108
Lancet Glob Health. 2018 Dec;6(12):e1319-e1328
pubmed: 30287125
Exp Parasitol. 2016 Nov;170:207-213
pubmed: 27717773
Acta Trop. 2020 Jul;207:105516
pubmed: 32371221
J Microbiol Methods. 2012 Apr;89(1):38-40
pubmed: 22366300
BMJ Mil Health. 2020 Nov 30;:
pubmed: 33257519
PLoS One. 2015 Nov 24;10(11):e0143388
pubmed: 26599971
J Clin Microbiol. 2002 Jul;40(7):2335-8
pubmed: 12089244
J Med Microbiol. 2013 Oct;62(Pt 10):1535-1539
pubmed: 23831766
Clin Microbiol Infect. 2015 Jun;21(6):520-8
pubmed: 25843505
Acta Clin Belg. 2013 May-Jun;68(3):188-92
pubmed: 24156218
Virulence. 2016 May 18;7(4):395-9
pubmed: 26890369
Diagn Microbiol Infect Dis. 2011 May;70(1):72-7
pubmed: 21513845
Am J Trop Med Hyg. 2014 Jan;90(1):133-8
pubmed: 24189366
BMJ. 2015 Oct 28;351:h5527
pubmed: 26511519