Systematic Analysis of Monoallelic Gene Expression and Chromatin Accessibility Across Multiple Tissues in Hybrid Mice.

allelic chromatin accessibility cis regulation gene expression hybrid mice monoallelic

Journal

Frontiers in cell and developmental biology
ISSN: 2296-634X
Titre abrégé: Front Cell Dev Biol
Pays: Switzerland
ID NLM: 101630250

Informations de publication

Date de publication:
2021
Historique:
received: 31 05 2021
accepted: 01 09 2021
entrez: 11 10 2021
pubmed: 12 10 2021
medline: 12 10 2021
Statut: epublish

Résumé

In diploid eukaryotic organisms, both alleles of each autosomal gene are usually assumed to be simultaneously expressed at similar levels. However, some genes can be expressed preferentially or strictly from a single allele, a process known as monoallelic expression. Classic monoallelic expression of X-chromosome-linked genes, olfactory receptor genes and developmentally imprinted genes is the result of epigenetic modifications. Genetic-origin-dependent monoallelic expression, however, is caused by

Identifiants

pubmed: 34631706
doi: 10.3389/fcell.2021.717555
pmc: PMC8495204
doi:

Types de publication

Journal Article

Langues

eng

Pagination

717555

Informations de copyright

Copyright © 2021 Liang, Zou, Li, Zhou, Tian and Schaefke.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Cell. 2019 Feb 21;176(5):952-965
pubmed: 30794780
Genome Res. 2012 Dec;22(12):2376-84
pubmed: 22919075
Genetics. 2012 Nov;192(3):1095-107
pubmed: 22887817
Science. 1975 Apr 11;188(4184):107-16
pubmed: 1090005
Curr Opin Immunol. 2008 Jun;20(3):308-17
pubmed: 18400481
Curr Opin Genet Dev. 2013 Apr;23(2):109-15
pubmed: 23465885
Mol Biol Evol. 2013 Sep;30(9):2121-33
pubmed: 23793114
Cell Syst. 2018 Jun 27;6(6):734-742.e4
pubmed: 29886108
Elife. 2017 Aug 14;6:
pubmed: 28806168
Mol Syst Biol. 2011 Aug 02;7:522
pubmed: 21811232
Annu Rev Genet. 2016 Nov 23;50:317-327
pubmed: 27893959
Nat Methods. 2017 Oct;14(10):959-962
pubmed: 28846090
Am J Med Genet. 1995 Mar 27;56(2):210-4
pubmed: 7625447
Nat Genet. 2015 Apr;47(4):353-60
pubmed: 25730764
Dev Cell. 2014 Feb 24;28(4):351-65
pubmed: 24576421
Cell Res. 2011 Mar;21(3):466-73
pubmed: 21283132
Bioinformatics. 2014 Apr 1;30(7):923-30
pubmed: 24227677
Genome Biol. 2010;11(12):R124
pubmed: 21182765
Mol Syst Biol. 2015 Jul 01;11(7):816
pubmed: 26134616
Science. 2012 Dec 21;338(6114):1587-93
pubmed: 23258890
PLoS Genet. 2013;9(10):e1003853
pubmed: 24098153
Science. 2012 Dec 21;338(6114):1593-9
pubmed: 23258891
Genes Cells. 2020 Jan;25(1):54-64
pubmed: 31733167
Mol Syst Biol. 2015 Aug 07;11(8):825
pubmed: 26253569
Essays Biochem. 2019 Dec 20;63(6):663-676
pubmed: 31782494
Genome Biol. 2014;15(12):550
pubmed: 25516281
Nat Genet. 2017 Mar;49(3):377-386
pubmed: 28112738
Dev Cell. 2014 Feb 24;28(4):366-80
pubmed: 24576422
Mol Biol Evol. 2018 Jun 1;35(6):1327-1331
pubmed: 29659993
Neuropsychopharmacology. 2013 Jan;38(1):55-61
pubmed: 22763620
Nature. 2004 Jul 1;430(6995):85-8
pubmed: 15229602
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Nat Commun. 2017 Oct 23;8(1):1092
pubmed: 29061983
Bioinformatics. 2015 Jul 15;31(14):2382-3
pubmed: 25765347
Nat Genet. 2008 Mar;40(3):346-50
pubmed: 18278046
Science. 2009 May 1;324(5927):659-62
pubmed: 19407207
Genome Res. 2010 Jun;20(6):826-36
pubmed: 20445163
Proc Natl Acad Sci U S A. 2018 Apr 10;115(15):E3481-E3490
pubmed: 29581298
Mol Syst Biol. 2016 Dec 8;12(12):890
pubmed: 27932516

Auteurs

Weizheng Liang (W)

Harbin Institute of Technology, Harbin, China.
Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Department of Biology, Southern University of Science and Technology, Shenzhen, China.

Xudong Zou (X)

Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Department of Biology, Southern University of Science and Technology, Shenzhen, China.

Guipeng Li (G)

Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Department of Biology, Southern University of Science and Technology, Shenzhen, China.
Academy for Advanced Interdisciplinary Studies, Southern University of Science and Technology, Shenzhen, China.

Shaojie Zhou (S)

Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Department of Biology, Southern University of Science and Technology, Shenzhen, China.

Chi Tian (C)

Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Department of Biology, Southern University of Science and Technology, Shenzhen, China.

Bernhard Schaefke (B)

Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Department of Biology, Southern University of Science and Technology, Shenzhen, China.
Academy for Advanced Interdisciplinary Studies, Southern University of Science and Technology, Shenzhen, China.

Classifications MeSH