BASE: A novel workflow to integrate nonubiquitous genes in comparative genomics analyses for selection.

CodeML dN/dS molecular evolution omega selective pressures

Journal

Ecology and evolution
ISSN: 2045-7758
Titre abrégé: Ecol Evol
Pays: England
ID NLM: 101566408

Informations de publication

Date de publication:
Oct 2021
Historique:
received: 23 02 2021
revised: 29 06 2021
accepted: 12 07 2021
entrez: 14 10 2021
pubmed: 15 10 2021
medline: 15 10 2021
Statut: epublish

Résumé

Inferring the selective forces that orthologous genes underwent across different lineages can help us understand the evolutionary processes that have shaped their extant diversity and the phenotypes they underlie. The most widespread metric to estimate the selection regimes of coding genes-across sites and phylogenies-is the ratio of nonsynonymous to synonymous substitutions (d

Identifiants

pubmed: 34646450
doi: 10.1002/ece3.7959
pii: ECE37959
pmc: PMC8495783
doi:

Types de publication

Journal Article

Langues

eng

Pagination

13029-13035

Informations de copyright

© 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

Déclaration de conflit d'intérêts

Authors declare that they have no competing interests.

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Auteurs

Giobbe Forni (G)

BiGeA Department University of Bologna Bologna Italy.

Angelo Alberto Ruggieri (AA)

Department of Biology University of Puerto Rico-Rio Piedras San Juan Puerto Rico.

Giovanni Piccinini (G)

BiGeA Department University of Bologna Bologna Italy.

Andrea Luchetti (A)

BiGeA Department University of Bologna Bologna Italy.

Classifications MeSH