Recommendations for good practice in MS-based lipidomics.

LC-MS MS chromatography ion mobility spectrometry lipid identification lipidomics metabolomics phospholipids sphingolipids

Journal

Journal of lipid research
ISSN: 1539-7262
Titre abrégé: J Lipid Res
Pays: United States
ID NLM: 0376606

Informations de publication

Date de publication:
2021
Historique:
received: 20 07 2021
revised: 29 09 2021
accepted: 01 10 2021
pubmed: 19 10 2021
medline: 25 3 2022
entrez: 18 10 2021
Statut: ppublish

Résumé

In the last 2 decades, lipidomics has become one of the fastest expanding scientific disciplines in biomedical research. With an increasing number of new research groups to the field, it is even more important to design guidelines for assuring high standards of data quality. The Lipidomics Standards Initiative is a community-based endeavor for the coordination of development of these best practice guidelines in lipidomics and is embedded within the International Lipidomics Society. It is the intention of this review to highlight the most quality-relevant aspects of the lipidomics workflow, including preanalytics, sample preparation, MS, and lipid species identification and quantitation. Furthermore, this review just does not only highlights examples of best practice but also sheds light on strengths, drawbacks, and pitfalls in the lipidomic analysis workflow. While this review is neither designed to be a step-by-step protocol by itself nor dedicated to a specific application of lipidomics, it should nevertheless provide the interested reader with links and original publications to obtain a comprehensive overview concerning the state-of-the-art practices in the field.

Identifiants

pubmed: 34662536
pii: S0022-2275(21)00120-6
doi: 10.1016/j.jlr.2021.100138
pmc: PMC8585648
pii:
doi:

Substances chimiques

Lipids 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

100138

Subventions

Organisme : NIEHS NIH HHS
ID : P30 ES025128
Pays : United States
Organisme : NIA NIH HHS
ID : RF1 AG061872
Pays : United States
Organisme : NIEHS NIH HHS
ID : P42 ES031009
Pays : United States
Organisme : NIA NIH HHS
ID : RF1 AG061729
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG066546
Pays : United States
Organisme : NIEHS NIH HHS
ID : P42 ES027704
Pays : United States

Informations de copyright

Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Conflict of interest The authors declare that they have no conflicts of interest with the contents of this article.

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Auteurs

Harald C Köfeler (HC)

Core Facility Mass Spectrometry, Medical University of Graz, Graz, Austria. Electronic address: harald.koefeler@medunigraz.at.

Robert Ahrends (R)

Department for Analytical Chemistry, University of Vienna, Vienna, Austria.

Erin S Baker (ES)

Department of Chemistry, North Carolina State University, Raleigh, NC, USA.

Kim Ekroos (K)

Lipidomics Consulting Ltd., Esbo, Finland.

Xianlin Han (X)

Barshop Inst Longev & Aging Studies, Univ Texas Hlth Sci Ctr San Antonio, San Antonio, TX, USA.

Nils Hoffmann (N)

Center for Biotechnology, Universität Bielefeld, Bielefeld, Germany.

Michal Holčapek (M)

Department of Analytical Chemistry, Faculty of Chemical Technology, University of Pardubice, Pardubice, Czech Republic.

Markus R Wenk (MR)

Singapore Lipidomics Incubator (SLING), Department of Biochemistry, YLL School of Medicine, National University of Singapore, Singapore, Singapore.

Gerhard Liebisch (G)

Institute of Clinical Chemistry and Laboratory Medicine, Regensburg University Hospital, Regensburg, Germany. Electronic address: gerhard.liebisch@klinik.uni-regensburg.de.

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