Multiomics analysis of serial PARP inhibitor treated metastatic TNBC inform on rational combination therapies.


Journal

NPJ precision oncology
ISSN: 2397-768X
Titre abrégé: NPJ Precis Oncol
Pays: England
ID NLM: 101708166

Informations de publication

Date de publication:
19 Oct 2021
Historique:
received: 08 10 2020
accepted: 22 09 2021
entrez: 20 10 2021
pubmed: 21 10 2021
medline: 21 10 2021
Statut: epublish

Résumé

In a pilot study, we evaluated the feasibility of real-time deep analysis of serial tumor samples from triple negative breast cancer patients to identify mechanisms of resistance and treatment opportunities as they emerge under therapeutic stress engendered by poly-ADP-ribose polymerase (PARP) inhibitors (PARPi). In a BRCA-mutant basal breast cancer exceptional long-term survivor, a striking tumor destruction was accompanied by a marked infiltration of immune cells containing CD8 effector cells, consistent with pre-clinical evidence for association between STING mediated immune activation and benefit from PARPi and immunotherapy. Tumor cells in the exceptional responder underwent extensive protein network rewiring in response to PARP inhibition. In contrast, there were minimal changes in the ecosystem of a luminal androgen receptor rapid progressor, likely due to indifference to the effects of PARP inhibition. Together, identification of PARPi-induced emergent changes could be used to select patient specific combination therapies, based on tumor and immune state changes.

Identifiants

pubmed: 34667258
doi: 10.1038/s41698-021-00232-w
pii: 10.1038/s41698-021-00232-w
pmc: PMC8526613
doi:

Types de publication

Journal Article

Langues

eng

Pagination

92

Subventions

Organisme : NIDDK NIH HHS
ID : R01 DK117459
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA232819
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA231877
Pays : United States
Organisme : NHGRI NIH HHS
ID : U54 HG008100
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA217842
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA199315
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA195469
Pays : United States
Organisme : NCI NIH HHS
ID : U54 CA209988
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA069533
Pays : United States
Organisme : NCI NIH HHS
ID : U2C CA233280
Pays : United States
Organisme : BLRD VA
ID : I01 BX002842
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA210957
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM086688
Pays : United States

Informations de copyright

© 2021. The Author(s).

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Auteurs

Marilyne Labrie (M)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA. labriem@ohsu.edu.
Department of Cell, Developmental & Cancer Biology, Oregon Health and Science University, Portland, OR, USA. labriem@ohsu.edu.

Allen Li (A)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Allison Creason (A)

Computational Biology Program, Oregon Health and Science University, Portland, OR, USA.

Courtney Betts (C)

Department of Cell, Developmental & Cancer Biology, Oregon Health and Science University, Portland, OR, USA.

Jamie Keck (J)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.

Brett Johnson (B)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.
Department of Biomedical Engineering, Oregon Health and Science University, Portland, OR, USA.

Shamilene Sivagnanam (S)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Computational Biology Program, Oregon Health and Science University, Portland, OR, USA.

Christopher Boniface (C)

Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR, USA.

Hongli Ma (H)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Department of Cell, Developmental & Cancer Biology, Oregon Health and Science University, Portland, OR, USA.

Aurora Blucher (A)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Department of Cell, Developmental & Cancer Biology, Oregon Health and Science University, Portland, OR, USA.

Young Hwan Chang (YH)

Computational Biology Program, Oregon Health and Science University, Portland, OR, USA.
Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.
Department of Biomedical Engineering, Oregon Health and Science University, Portland, OR, USA.

Koei Chin (K)

Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.
Department of Biomedical Engineering, Oregon Health and Science University, Portland, OR, USA.

Jacqueline Vuky (J)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Alexander R Guimaraes (AR)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Department of Diagnostic Radiology, Oregon Health and Science University, Portland, OR, USA.

Molly Downey (M)

Department of Diagnostic Radiology, Oregon Health and Science University, Portland, OR, USA.

Jeong Youn Lim (JY)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Lina Gao (L)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Kiara Siex (K)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Swapnil Parmar (S)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Annette Kolodzie (A)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.

Paul T Spellman (PT)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.
Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR, USA.

Jeremy Goecks (J)

Computational Biology Program, Oregon Health and Science University, Portland, OR, USA.

Lisa M Coussens (LM)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Department of Cell, Developmental & Cancer Biology, Oregon Health and Science University, Portland, OR, USA.

Christopher L Corless (CL)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Department of Pathology, Oregon Health and Science University, Portland, OR, USA.

Raymond Bergan (R)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.

Joe W Gray (JW)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Center for Spatial Systems Biomedicine (OCSSB), Oregon Health and Science University, Portland, OR, USA.
Department of Biomedical Engineering, Oregon Health and Science University, Portland, OR, USA.

Gordon B Mills (GB)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Department of Cell, Developmental & Cancer Biology, Oregon Health and Science University, Portland, OR, USA.
Department of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Zahi I Mitri (ZI)

Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA. mitri@ohsu.edu.

Classifications MeSH