Use of Machine Learning-Based Software for the Screening of Thyroid Cytopathology Whole Slide Images.


Journal

Archives of pathology & laboratory medicine
ISSN: 1543-2165
Titre abrégé: Arch Pathol Lab Med
Pays: United States
ID NLM: 7607091

Informations de publication

Date de publication:
01 07 2022
Historique:
accepted: 08 07 2021
pubmed: 21 10 2021
medline: 30 6 2022
entrez: 20 10 2021
Statut: ppublish

Résumé

The use of whole slide images (WSIs) in diagnostic pathology presents special challenges for the cytopathologist. Informative areas on a direct smear from a thyroid fine-needle aspiration biopsy (FNAB) smear may be spread across a large area comprising blood and dead space. Manually navigating through these areas makes screening and evaluation of FNA smears on a digital platform time-consuming and laborious. We designed a machine learning algorithm that can identify regions of interest (ROIs) on thyroid fine-needle aspiration biopsy WSIs. To evaluate the ability of the machine learning algorithm and screening software to identify and screen for a subset of informative ROIs on a thyroid FNA WSI that can be used for final diagnosis. A representative slide from each of 109 consecutive thyroid fine-needle aspiration biopsies was scanned. A cytopathologist reviewed each WSI and recorded a diagnosis. The machine learning algorithm screened and selected a subset of 100 ROIs from each WSI to present as an image gallery to the same cytopathologist after a washout period of 117 days. Concordance between the diagnoses using WSIs and those using the machine learning algorithm-generated ROI image gallery was evaluated using pairwise weighted κ statistics. Almost perfect concordance was seen between the 2 methods with a κ score of 0.924. Our results show the potential of the screening software as an effective screening tool with the potential to reduce cytopathologist workloads.

Identifiants

pubmed: 34669924
pii: 472362
doi: 10.5858/arpa.2020-0712-OA
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

872-878

Auteurs

David Dov (D)

From the Department of Electrical and Computer Engineering (Dov, Assaad, Carin), Duke University, Durham, North Carolina.

Shahar Z Kovalsky (SZ)

From the Department of Mathematics, University of North Carolina at Chapel Hill (Kovalsky).

Qizhang Feng (Q)

From the Department of Computer Science & Engineering, Texas A&M University, College Station (Feng).

Serge Assaad (S)

From the Department of Electrical and Computer Engineering (Dov, Assaad, Carin), Duke University, Durham, North Carolina.

Jonathan Cohen (J)

From the Department of Head and Neck Surgery, Kaplan Medical Center, Rehovot, Israel (Cohen).

Jonathan Bell (J)

From the Department of Pathology (Bell, Range), Duke University Medical Center, Durham, North Carolina.

Ricardo Henao (R)

From the Department of Biostatistics and Bioinformatics (Henao), Duke University, Durham, North Carolina.

Lawrence Carin (L)

From the Department of Electrical and Computer Engineering (Dov, Assaad, Carin), Duke University, Durham, North Carolina.
Carin is currently located in the Office of the Provost at King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia.

Danielle Elliott Range (DE)

From the Department of Pathology (Bell, Range), Duke University Medical Center, Durham, North Carolina.

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