Genome-wide association study of colorectal polyps identified highly overlapping polygenic architecture with colorectal cancer.


Journal

Journal of human genetics
ISSN: 1435-232X
Titre abrégé: J Hum Genet
Pays: England
ID NLM: 9808008

Informations de publication

Date de publication:
Mar 2022
Historique:
received: 22 05 2021
accepted: 20 09 2021
revised: 04 09 2021
pubmed: 22 10 2021
medline: 5 4 2022
entrez: 21 10 2021
Statut: ppublish

Résumé

No genome-wide association studies (GWAS) were reported for colorectal polyps and the overlap in polygenic backgrounds conferring risk of colorectal cancer and polyps remains unclear. We performed GWAS on subjects with colorectal polyps using the BioBank Japan data with 4447 cases and 157,226 controls. We evaluated genetic correlations between colorectal polyps and cancer, and effects on colorectal polyps of single nucleotide polymorphisms (SNPs) known to be associated with colorectal cancer. We identified CUX2, a known genetic locus to colorectal cancer, as a susceptibility locus to colorectal polyps (p value = 1.1 × 10

Identifiants

pubmed: 34671089
doi: 10.1038/s10038-021-00980-4
pii: 10.1038/s10038-021-00980-4
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

149-156

Investigateurs

Yuji Yamanashi (Y)
Yoichi Furukawa (Y)
Takayuki Morisaki (T)
Yoshinori Murakami (Y)
Yoichiro Kamatani (Y)
Kaori Muto (K)
Akiko Nagai (A)
Wataru Obara (W)
Ken Yamaji (K)
Kazuhisa Takahashi (K)
Satoshi Asai (S)
Yasuo Takahashi (Y)
Takao Suzuki (T)
Nobuaki Sinozaki (N)
Hiroki Yamaguchi (H)
Shiro Minami (S)
Shigeo Murayama (S)
Kozo Yoshimori (K)
Satoshi Nagayama (S)
Daisuke Obata (D)
Masahiko Higashiyama (M)
Akihide Masumoto (A)
Yukihiro Koretsune (Y)

Informations de copyright

© 2021. The Author(s), under exclusive licence to The Japan Society of Human Genetics.

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Auteurs

Keiko Hikino (K)

Laboratory for Pharmacogenomics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.

Masaru Koido (M)

Laboratory for Statistical and Translational Genetics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Division of Molecular Pathology, Institute of Medical Science, The University of Tokyo, 4-6-1, Shirokane-dai, Minato-ku, Tokyo, 108-8639, Japan.

Nao Otomo (N)

Laboratory for Bone and Joint Diseases, Center for Integrative Medical Sciences, RIKEN, Tokyo, 108-8639, Japan.
Department of Orthopedic Surgery, Keio University School of Medicine, Tokyo, 160-8582, Japan.

Kohei Tomizuka (K)

Laboratory for Statistical and Translational Genetics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.

Shiro Ikegawa (S)

Laboratory for Bone and Joint Diseases, Center for Integrative Medical Sciences, RIKEN, Tokyo, 108-8639, Japan.

Koichi Matsuda (K)

Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Tokyo, 108-8639, Japan.

Yukihide Momozawa (Y)

Laboratory for Genotyping Development, Center for Integrative Medical Sciences, RIKEN, Tokyo, 108-8639, Japan.

Taisei Mushiroda (T)

Laboratory for Pharmacogenomics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.

Chikashi Terao (C)

Laboratory for Statistical and Translational Genetics, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan. chikashi.terao@riken.jp.
Clinical Research Center, Shizuoka General Hospital, Shizuoka, Japan. chikashi.terao@riken.jp.
The Department of Applied Genetics, The School of Pharmaceutical Sciences, University of Shizuoka, Shizuoka, Japan. chikashi.terao@riken.jp.

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