Domain-Agnostic Learning with Anatomy-Consistent Embedding for Cross-Modality Liver Segmentation.


Journal

... IEEE International Conference on Computer Vision workshops. IEEE International Conference on Computer Vision
ISSN: 2473-9944
Titre abrégé: IEEE Int Conf Comput Vis Workshops
Pays: United States
ID NLM: 101764174

Informations de publication

Date de publication:
Oct 2019
Historique:
entrez: 22 10 2021
pubmed: 1 10 2019
medline: 1 10 2019
Statut: ppublish

Résumé

Domain Adaptation (DA) has the potential to greatly help the generalization of deep learning models. However, the current literature usually assumes to transfer the knowledge from the source domain to a specific known target domain. Domain Agnostic Learning (DAL) proposes a new task of transferring knowledge from the source domain to data from multiple heterogeneous target domains. In this work, we propose the Domain-Agnostic Learning framework with Anatomy-Consistent Embedding (DALACE) that works on both domain-transfer and task-transfer to learn a disentangled representation, aiming to not only be invariant to different modalities but also preserve anatomical structures for the DA and DAL tasks in cross-modality liver segmentation. We validated and compared our model with state-of-the-art methods, including CycleGAN, Task Driven Generative Adversarial Network (TD-GAN), and Domain Adaptation via Disentangled Representations (DADR). For the DA task, our DALACE model outperformed CycleGAN, TD-GAN, and DADR with DSC of 0.847 compared to 0.721, 0.793 and 0.806. For the DAL task, our model improved the performance with DSC of 0.794 from 0.522, 0.719 and 0.742 by CycleGAN, TD-GAN, and DADR. Further, we visualized the success of disentanglement, which added human interpretability of the learned meaningful representations. Through ablation analysis, we specifically showed the concrete benefits of disentanglement for downstream tasks and the role of supervision for better disentangled representation with segmentation consistency to be invariant to domains with the proposed Domain-Agnostic Module (DAM) and to preserve anatomical information with the proposed Anatomy-Preserving Module (APM).

Identifiants

pubmed: 34676308
doi: 10.1109/iccvw.2019.00043
pmc: PMC8528125
mid: NIHMS1596812
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : NCI NIH HHS
ID : R01 CA206180
Pays : United States

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Auteurs

Junlin Yang (J)

Department of Biomedical Engineering, Yale University.

Nicha C Dvornek (NC)

Department of Radiology & Biomedical Imaging, Yale School of Medicine.

Fan Zhang (F)

Department of Biomedical Engineering, Yale University.

Juntang Zhuang (J)

Department of Biomedical Engineering, Yale University.

Julius Chapiro (J)

Department of Radiology & Biomedical Imaging, Yale School of Medicine.

MingDe Lin (M)

Department of Radiology & Biomedical Imaging, Yale School of Medicine.

James S Duncan (JS)

Department of Biomedical Engineering, Yale University.
Department of Electrical Engineering, Yale University.
Department of Radiology & Biomedical Imaging, Yale School of Medicine.
Department of Statistics & Data Science, Yale University.

Classifications MeSH