Classification of imbalanced oral cancer image data from high-risk population.

deep learning ensemble learning imbalanced multi-class datasets mobile screening device oral cancer

Journal

Journal of biomedical optics
ISSN: 1560-2281
Titre abrégé: J Biomed Opt
Pays: United States
ID NLM: 9605853

Informations de publication

Date de publication:
10 2021
Historique:
received: 03 08 2021
accepted: 28 09 2021
entrez: 24 10 2021
pubmed: 25 10 2021
medline: 17 11 2021
Statut: ppublish

Résumé

Early detection of oral cancer is vital for high-risk patients, and machine learning-based automatic classification is ideal for disease screening. However, current datasets collected from high-risk populations are unbalanced and often have detrimental effects on the performance of classification. To reduce the class bias caused by data imbalance. We collected 3851 polarized white light cheek mucosa images using our customized oral cancer screening device. We use weight balancing, data augmentation, undersampling, focal loss, and ensemble methods to improve the neural network performance of oral cancer image classification with the imbalanced multi-class datasets captured from high-risk populations during oral cancer screening in low-resource settings. By applying both data-level and algorithm-level approaches to the deep learning training process, the performance of the minority classes, which were difficult to distinguish at the beginning, has been improved. The accuracy of "premalignancy" class is also increased, which is ideal for screening applications. Experimental results show that the class bias induced by imbalanced oral cancer image datasets could be reduced using both data- and algorithm-level methods. Our study may provide an important basis for helping understand the influence of unbalanced datasets on oral cancer deep learning classifiers and how to mitigate.

Identifiants

pubmed: 34689442
pii: JBO-210246R
doi: 10.1117/1.JBO.26.10.105001
pmc: PMC8536945
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIDCR NIH HHS
ID : R01 DE030682
Pays : United States
Organisme : NIBIB NIH HHS
ID : UH2 EB022623
Pays : United States
Organisme : NCI NIH HHS
ID : UH3 CA239682
Pays : United States

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Auteurs

Bofan Song (B)

The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.

Shaobai Li (S)

The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.

Sumsum Sunny (S)

Mazumdar Shaw Medical Centre, Bangalore, India.

Keerthi Gurushanth (K)

KLE Society Institute of Dental Sciences, Bangalore, India.

Pramila Mendonca (P)

Mazumdar Shaw Medical Foundation, Bangalore, India.

Nirza Mukhia (N)

KLE Society Institute of Dental Sciences, Bangalore, India.

Sanjana Patrick (S)

Biocon Foundation, Bangalore, India.

Shubha Gurudath (S)

KLE Society Institute of Dental Sciences, Bangalore, India.

Subhashini Raghavan (S)

KLE Society Institute of Dental Sciences, Bangalore, India.

Imchen Tsusennaro (I)

Christian Institute of Health Sciences and Research, Dimapur, India.

Shirley T Leivon (ST)

Christian Institute of Health Sciences and Research, Dimapur, India.

Trupti Kolur (T)

Mazumdar Shaw Medical Foundation, Bangalore, India.

Vivek Shetty (V)

Mazumdar Shaw Medical Foundation, Bangalore, India.

Vidya Bushan (V)

Mazumdar Shaw Medical Foundation, Bangalore, India.

Rohan Ramesh (R)

Christian Institute of Health Sciences and Research, Dimapur, India.

Tyler Peterson (T)

The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.

Vijay Pillai (V)

Mazumdar Shaw Medical Foundation, Bangalore, India.

Petra Wilder-Smith (P)

University of California Beckman Laser Institute and Medical Clinic, Irvine, California, United States.

Alben Sigamani (A)

Mazumdar Shaw Medical Foundation, Bangalore, India.

Amritha Suresh (A)

Mazumdar Shaw Medical Centre, Bangalore, India.
Mazumdar Shaw Medical Foundation, Bangalore, India.

Moni Abraham Kuriakose (MA)

Cochin Cancer Research Center, Kochi, India.

Praveen Birur (P)

KLE Society Institute of Dental Sciences, Bangalore, India.
Biocon Foundation, Bangalore, India.

Rongguang Liang (R)

The University of Arizona, Wyant College of Optical Sciences, Tucson, Arizona, United States.

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