Automated image segmentation method to analyse skeletal muscle cross section in exercise-induced regenerating myofibers.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
29 10 2021
Historique:
received: 20 07 2021
accepted: 14 10 2021
entrez: 30 10 2021
pubmed: 31 10 2021
medline: 22 1 2022
Statut: epublish

Résumé

Skeletal muscle is an adaptive tissue with the ability to regenerate in response to exercise training. Cross-sectional area (CSA) quantification, as a main parameter to assess muscle regeneration capability, is highly tedious and time-consuming, necessitating an accurate and automated approach to analysis. Although several excellent programs are available to automate analysis of muscle histology, they fail to efficiently and accurately measure CSA in regenerating myofibers in response to exercise training. Here, we have developed a novel fully-automated image segmentation method based on neutrosophic set algorithms to analyse whole skeletal muscle cross sections in exercise-induced regenerating myofibers, referred as MyoView, designed to obtain accurate fiber size and distribution measurements. MyoView provides relatively efficient, accurate, and reliable measurements for CSA quantification and detecting different myofibers, myonuclei and satellite cells in response to the post-exercise regenerating process. We showed that MyoView is comparable with manual quantification. We also showed that MyoView is more accurate and efficient to measure CSA in post-exercise regenerating myofibers as compared with Open-CSAM, MuscleJ, SMASH and MyoVision. Furthermore, we demonstrated that to obtain an accurate CSA quantification of exercise-induced regenerating myofibers, whole muscle cross-section analysis is an essential part, especially for the measurement of different fiber-types. We present MyoView as a new tool to quantify CSA, myonuclei and satellite cells in skeletal muscle from any experimental condition including exercise-induced regenerating myofibers.

Identifiants

pubmed: 34716401
doi: 10.1038/s41598-021-00886-3
pii: 10.1038/s41598-021-00886-3
pmc: PMC8556272
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

21327

Informations de copyright

© 2021. The Author(s).

Références

Skelet Muscle. 2019 Jan 8;9(1):2
pubmed: 30621783
Sci Rep. 2019 Apr 30;9(1):6644
pubmed: 31040327
J Vis Exp. 2017 Aug 31;(126):
pubmed: 28892032
Proc Nutr Soc. 2020 Feb;79(1):158-169
pubmed: 31685055
Skelet Muscle. 2014 Nov 27;4:21
pubmed: 25937889
Sci Rep. 2021 May 5;11(1):9535
pubmed: 33953268
Skelet Muscle. 2018 Aug 6;8(1):25
pubmed: 30081940
Gene. 2019 Apr 15;692:185-194
pubmed: 30682386
J Appl Physiol (1985). 2018 Jan 01;124(1):40-51
pubmed: 28982947
Skelet Muscle. 2018 Oct 18;8(1):32
pubmed: 30336774
BMC Bioinformatics. 2017 Nov 29;18(1):529
pubmed: 29187165
IEEE Trans Biomed Eng. 2018 May;65(5):989-1001
pubmed: 28783619
Front Physiol. 2019 Nov 29;10:1416
pubmed: 31849692
Nat Med. 2015 Jan;21(1):76-80
pubmed: 25501907
Skelet Muscle. 2020 Nov 16;10(1):33
pubmed: 33198807
Elife. 2019 Apr 23;8:
pubmed: 31012848
J Appl Physiol (1985). 2013 Jan 1;114(1):148-55
pubmed: 23139362
BMC Musculoskelet Disord. 2013 Jan 16;14:26
pubmed: 23324401
J Appl Physiol (1985). 2013 Dec;115(11):1714-24
pubmed: 24092696
Skelet Muscle. 2021 Jan 11;11(1):4
pubmed: 33431060
Sci Rep. 2020 May 26;10(1):8738
pubmed: 32457392
PLoS One. 2020 Mar 4;15(3):e0229041
pubmed: 32130242
Sci Rep. 2021 Jun 3;11(1):11793
pubmed: 34083673
PLoS One. 2017 Oct 23;12(10):e0186949
pubmed: 29059257

Auteurs

Masoud Rahmati (M)

Department of Exercise Physiology, Faculty of Literature and Human Sciences, Lorestan University, Khoramabad, Iran. rahmati.mas@lu.ac.ir.

Abdolreza Rashno (A)

Department of Computer Engineering, Lorestan University, Khorramabad, Iran.

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Classifications MeSH