Inability to switch from ARID1A-BAF to ARID1B-BAF impairs exit from pluripotency and commitment towards neural crest formation in ARID1B-related neurodevelopmental disorders.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
09 11 2021
Historique:
received: 08 04 2021
accepted: 21 10 2021
entrez: 10 11 2021
pubmed: 11 11 2021
medline: 28 12 2021
Statut: epublish

Résumé

Subunit switches in the BAF chromatin remodeler are essential during development. ARID1B and its paralog ARID1A encode for mutually exclusive BAF subunits. De novo ARID1B haploinsufficient mutations cause neurodevelopmental disorders, including Coffin-Siris syndrome, which is characterized by neurological and craniofacial features. Here, we leveraged ARID1B

Identifiants

pubmed: 34753942
doi: 10.1038/s41467-021-26810-x
pii: 10.1038/s41467-021-26810-x
pmc: PMC8578637
doi:

Substances chimiques

ARID1A protein, human 0
ARID1B protein, human 0
Chromatin 0
DNA-Binding Proteins 0
NANOG protein, human 0
Nanog Homeobox Protein 0
SOX2 protein, human 0
SOXB1 Transcription Factors 0
Transcription Factors 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

6469

Subventions

Organisme : NCI NIH HHS
ID : R01 CA257251
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL127895
Pays : United States
Organisme : NCI NIH HHS
ID : T32 CA009171
Pays : United States

Informations de copyright

© 2021. The Author(s).

Références

Cell. 2008 Feb 22;132(4):567-82
pubmed: 18295576
EMBO J. 1996 Oct 1;15(19):5370-82
pubmed: 8895581
Exp Cell Res. 2006 Aug 1;312(13):2538-46
pubmed: 16737695
Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5187-91
pubmed: 19279218
Lancet. 2015 Apr 4;385(9975):1305-14
pubmed: 25529582
PLoS Genet. 2015 Dec 30;11(12):e1005748
pubmed: 26716708
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Clin Genet. 2012 Sep;82(3):248-55
pubmed: 21801163
J Neurosci. 2016 Mar 2;36(9):2723-42
pubmed: 26937011
Clin Genet. 2014 Jun;85(6):548-54
pubmed: 23815551
Clin Case Rep. 2016 Feb 28;4(4):351-5
pubmed: 27099726
Mol Autism. 2021 Mar 23;12(1):25
pubmed: 33757588
Mol Cell. 2019 Sep 5;75(5):891-904.e7
pubmed: 31375262
Nat Commun. 2018 Dec 3;9(1):5139
pubmed: 30510198
Nat Neurosci. 2017 Dec;20(12):1694-1707
pubmed: 29184203
Cell. 2018 Nov 15;175(5):1272-1288.e20
pubmed: 30343899
J Clin Med. 2018 Nov 27;7(12):
pubmed: 30486372
Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5838-5845
pubmed: 28584089
Int J Mol Sci. 2017 Aug 30;18(9):
pubmed: 28867767
Sci Rep. 2020 May 12;10(1):7834
pubmed: 32398858
Nature. 2020 Apr;580(7805):669-672
pubmed: 32350470
Nat Genet. 2013 Jan;45(1):12-7
pubmed: 23202128
Genome Biol. 2014;15(12):550
pubmed: 25516281
Nat Biotechnol. 2016 May;34(5):525-7
pubmed: 27043002
Genes Dev. 2016 May 1;30(9):1101-15
pubmed: 27125671
Nat Genet. 2004 Apr;36(4):361-9
pubmed: 15004559
PLoS One. 2009;4(5):e5577
pubmed: 19440552
Mol Syndromol. 2012 Apr;2(6):237-244
pubmed: 22822383
Gene. 2016 Jun 15;584(2):111-9
pubmed: 26892498
Hum Mutat. 2020 May;41(5):1012-1024
pubmed: 31981384
Mol Cell. 2017 Dec 21;68(6):1067-1082.e12
pubmed: 29272704
Elife. 2017 Mar 13;6:
pubmed: 28287392
Sci Adv. 2015 Jun 12;1(5):e1500447
pubmed: 26601204
Genet Med. 2019 Jun;21(6):1295-1307
pubmed: 30349098
EMBO J. 2013 Aug 14;32(16):2231-47
pubmed: 23892456
Genes Dev. 2021 Mar 1;35(5-6):335-353
pubmed: 33602870
Cell. 2013 Apr 11;153(2):335-47
pubmed: 23582324
Proc Natl Acad Sci U S A. 2008 Dec 16;105(50):19756-61
pubmed: 19060217
Front Cell Dev Biol. 2021 Mar 04;9:643361
pubmed: 33748136
Cell Res. 2011 Jun;21(6):884-94
pubmed: 21445094
Am J Hum Genet. 2015 Sep 3;97(3):445-56
pubmed: 26340334
BMC Bioinformatics. 2011 Aug 04;12:323
pubmed: 21816040
Neuron. 2007 Jul 19;55(2):201-15
pubmed: 17640523
Nat Methods. 2013 Dec;10(12):1213-8
pubmed: 24097267
Hum Mutat. 2013 Nov;34(11):1519-28
pubmed: 23929686
J Biol Chem. 2005 Jul 1;280(26):24731-7
pubmed: 15860457
Genome Biol. 2008;9(9):R137
pubmed: 18798982
Epigenetics Chromatin. 2019 Mar 21;12(1):19
pubmed: 30898143
Cell Rep. 2018 Jun 26;23(13):3933-3945
pubmed: 29949775
Development. 2016 Sep 1;143(17):3074-84
pubmed: 27471257
Neurogenetics. 2015 Oct;16(4):307-14
pubmed: 26238514
Mol Cell. 2010 May 28;38(4):576-89
pubmed: 20513432
PPAR Res. 2007;2007:61563
pubmed: 18274628
Nat Genet. 2017 Feb;49(2):296-302
pubmed: 27941798
Mol Cell. 2021 Feb 18;81(4):845-858.e8
pubmed: 33406384
Nat Genet. 2012 Mar 18;44(4):379-80
pubmed: 22426309
Bioinformatics. 2013 Jan 1;29(1):15-21
pubmed: 23104886
Hum Mol Genet. 2013 Dec 20;22(25):5121-35
pubmed: 23906836
Nat Commun. 2019 Mar 7;10(1):1109
pubmed: 30846691
Cell. 2009 Aug 21;138(4):722-37
pubmed: 19703398
Nat Rev Mol Cell Biol. 2016 Mar;17(3):183-93
pubmed: 26883003
EMBO J. 2012 Dec 12;31(24):4547-62
pubmed: 23178592
Cell Syst. 2020 Jun 24;10(6):480-494.e8
pubmed: 32553182
Cell. 2015 Sep 24;163(1):68-83
pubmed: 26365491
Am J Hum Genet. 2012 Mar 9;90(3):565-72
pubmed: 22405089
Bioinformatics. 2010 Mar 15;26(6):841-2
pubmed: 20110278
Nucleic Acids Res. 2009 Jul;37(Web Server issue):W202-8
pubmed: 19458158
Cell Res. 2010 Dec;20(12):1345-60
pubmed: 21079652
Mol Ther. 2011 Apr;19(4):782-9
pubmed: 21285961
Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5181-6
pubmed: 19279220

Auteurs

Luca Pagliaroli (L)

Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

Patrizia Porazzi (P)

Department of Cancer Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

Alyxandra T Curtis (AT)

Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

Chiara Scopa (C)

Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

Harald M M Mikkers (HMM)

Department of Cell & Chemical Biology, Leiden University Medical Center, Leiden, The Netherlands.

Christian Freund (C)

LUMC hiPSC Hotel, Dept. Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands.

Lucia Daxinger (L)

Department of Human Genetics, Leiden University Medical Center (LUMC), Leiden, 2300, RC, The Netherlands.

Sandra Deliard (S)

Gene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA, USA.

Sarah A Welsh (SA)

Gene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA, USA.

Sarah Offley (S)

Gene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA, USA.

Connor A Ott (CA)

Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

Bruno Calabretta (B)

Department of Cancer Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

Samantha A Brugmann (SA)

Divisions of Developmental Biology and Plastic Surgery, Department of Pediatrics at Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.

Gijs W E Santen (GWE)

Department of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.

Marco Trizzino (M)

Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA. marco.trizzino@jefferson.edu.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH