Multivariate data driven prediction of COVID-19 dynamics: Towards new results with temperature, humidity and air quality data.

AI prediction Air quality and temperature COVID-19 dynamics COVID-19 epidemiology Multivariate forecast Time-series forecast

Journal

Environmental research
ISSN: 1096-0953
Titre abrégé: Environ Res
Pays: Netherlands
ID NLM: 0147621

Informations de publication

Date de publication:
03 2022
Historique:
received: 11 05 2021
revised: 01 11 2021
accepted: 02 11 2021
pubmed: 13 11 2021
medline: 15 12 2021
entrez: 12 11 2021
Statut: ppublish

Résumé

Since the start of the COVID-19 pandemic many studies investigated the correlation between climate variables such as air quality, humidity and temperature and the lethality of COVID-19 around the world. In this work we investigate the use of climate variables, as additional features to train a data-driven multivariate forecast model to predict the short-term expected number of COVID-19 deaths in Brazilian states and major cities. The main idea is that by adding these climate features as inputs to the training of data-driven models, the predictive performance improves when compared to equivalent single input models. We use a Stacked LSTM as the network architecture for both the multivariate and univariate model. We compare both approaches by training forecast models for the COVID-19 deaths time series of the city of São Paulo. In addition, we present a previous analysis based on grouping K-means on AQI curves. The results produced will allow achieving the application of transfer learning, once a locality is eventually added to the task, regressing out using a model based on the cluster of similarities in the AQI curve. The experiments show that the best multivariate model is more skilled than the best standard data-driven univariate model that we could find, using as evaluation metrics the average fitting error, average forecast error, and the profile of the accumulated deaths for the forecast. These results show that by adding more useful features as input to a multivariate approach could further improve the quality of the prediction models.

Identifiants

pubmed: 34767822
pii: S0013-9351(21)01649-2
doi: 10.1016/j.envres.2021.112348
pmc: PMC8577104
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

112348

Informations de copyright

Copyright © 2021 Elsevier Inc. All rights reserved.

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Auteurs

Dunfrey P Aragão (DP)

Universidade Federal do Rio Grande do Norte, Av. Salgado Filho, Campus Universitário, 59.078-970, Natal, 3000, Brazil.

Emerson V Oliveira (EV)

Universidade Federal do Rio Grande do Norte, Av. Salgado Filho, Campus Universitário, 59.078-970, Natal, 3000, Brazil.

Arthur A Bezerra (AA)

Universidade Federal do Rio Grande do Norte, Av. Salgado Filho, Campus Universitário, 59.078-970, Natal, 3000, Brazil.

Davi H Dos Santos (DH)

Universidade Federal do Rio Grande do Norte, Av. Salgado Filho, Campus Universitário, 59.078-970, Natal, 3000, Brazil.

Andouglas G da Silva Junior (AG)

Instituto Federal do Rio Grande do Norte, R. Raimundo Firmino de Oliveira, 400, 59.628-330, Mossoró, Brazil.

Igor G Pereira (IG)

Universidade Federal do Rio Grande do Norte, Av. Salgado Filho, Campus Universitário, 59.078-970, Natal, 3000, Brazil.

Prisco Piscitelli (P)

Italian Society of Environmental Medicine, SIMA, Milan, Italy.

Alessandro Miani (A)

Department of Environmental Science and Policy, University of Milan, Milan, Italy.

Cosimo Distante (C)

Institute of Applied Sciences and Intelligent Systems, via Monteroni sn, 73100, Lecce, Italy.

Jordan S Cuno (JS)

Universidade Federal Fluminense, Av. Gal. Milton Tavares de Souza, s/n, São Domingos, 24.210-346, Niteroi, Brazil.

Aura Conci (A)

Universidade Federal Fluminense, Av. Gal. Milton Tavares de Souza, s/n, São Domingos, 24.210-346, Niteroi, Brazil.

Luiz M G Gonçalves (LMG)

Universidade Federal do Rio Grande do Norte, Av. Salgado Filho, Campus Universitário, 59.078-970, Natal, 3000, Brazil. Electronic address: lmarcos@dca.ufrn.br.

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Classifications MeSH