Nine Mitochondrial Genomes of the Pyraloidea and Their Phylogenetic Implications (Lepidoptera).

Crambidae Orybina Pyralidae mitogenome phylogeny

Journal

Insects
ISSN: 2075-4450
Titre abrégé: Insects
Pays: Switzerland
ID NLM: 101574235

Informations de publication

Date de publication:
18 Nov 2021
Historique:
received: 18 10 2021
revised: 16 11 2021
accepted: 16 11 2021
entrez: 25 11 2021
pubmed: 26 11 2021
medline: 26 11 2021
Statut: epublish

Résumé

The Pyraloidea is one of the species-rich superfamilies of Lepidoptera and contains numerous economically important pest species that cause great loss in crop production. Here, we sequenced and annotated nine complete mitogenomes for Pyraloidea, and further performed various phylogenetic analyses, to improve our understanding of mitogenomic evolution and phylogeny of this superfamily. The nine mitogenomes were circular, double-stranded molecules, with the lengths ranging from 15,214 bp to 15,422 bp, which are comparable to other reported pyraloid mitogenomes in size. Gene content and arrangement were highly conserved and are typical of Lepidoptera. Based on the hitherto most extensive mitogenomic sampling, our various resulting trees showed generally congruent topologies among pyraloid subfamilies, which are almost in accordance with previous multilocus studies, indicating the suitability of mitogenomes in inferring high-level relationships of Pyraloidea. However, nodes linking subfamilies in the "

Identifiants

pubmed: 34821839
pii: insects12111039
doi: 10.3390/insects12111039
pmc: PMC8623390
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : National Natural Science Foundation of China
ID : 31702046
Organisme : National Natural Science Foundation of China
ID : 31601883
Organisme : Technological Innovation Talent Project of Henan Province, China
ID : 19HASTIT015
Organisme : China Postdoctoral Science Foundation
ID : 2021M692244
Organisme : Young Backbone Teacher Guiding Foundation in Colleges and universities in Henan Province
ID : 2020GGJS211

Références

Mol Phylogenet Evol. 2015 Apr;85:230-7
pubmed: 25698356
Gene. 2008 Jan 31;408(1-2):112-23
pubmed: 18065166
Genome. 2016 Jan;59(1):37-49
pubmed: 26701149
Nucleic Acids Res. 1999 Apr 15;27(8):1767-80
pubmed: 10101183
Mol Biol Rep. 2013 Nov;40(11):6333-49
pubmed: 24057247
Mitochondrial DNA. 2013 Dec;24(6):622-4
pubmed: 23452242
Genomics. 2018 Sep;110(5):274-282
pubmed: 29191682
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2833-4
pubmed: 26152351
Cladistics. 2018 Apr;34(2):113-130
pubmed: 34645082
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W7-13
pubmed: 20435676
Mitochondrial DNA B Resour. 2021 Jul 9;6(8):2316-2318
pubmed: 34291169
Mol Biol Evol. 2017 Mar 1;34(3):772-773
pubmed: 28013191
Genomics. 2019 Jul;111(4):744-752
pubmed: 29684432
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
Int J Biol Macromol. 2019 Feb 15;123:485-493
pubmed: 30359659
Insects. 2020 Apr 07;11(4):
pubmed: 32272743
Mitochondrial DNA B Resour. 2017 Oct 17;2(2):714-715
pubmed: 33473956
Int J Biol Sci. 2012;8(4):561-79
pubmed: 22532789
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4044-4045
pubmed: 25629474
J Insect Sci. 2012;12:72
pubmed: 23413968
Gene. 2013 Sep 10;526(2):309-17
pubmed: 23747351
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):28-9
pubmed: 24438259
Gene. 2014 Sep 15;548(2):270-6
pubmed: 25042162
Chromosome Res. 2013 Aug;21(5):491-505
pubmed: 23949445
Mitochondrial DNA B Resour. 2018 Feb 10;3(1):189-190
pubmed: 33490496
BMC Res Notes. 2016 Feb 12;9:88
pubmed: 26868221
Syst Biol. 2018 Sep 1;67(5):901-904
pubmed: 29718447
Int J Biol Macromol. 2019 Sep 1;136:123-132
pubmed: 31199977
Mitochondrial DNA B Resour. 2017 Jun 5;2(1):344-346
pubmed: 33473822
Proc Biol Sci. 2003 Aug 7;270 Suppl 1:S96-9
pubmed: 12952648
Annu Rev Entomol. 2014;59:95-117
pubmed: 24160435
Gigascience. 2012 Dec 27;1(1):18
pubmed: 23587118
Nucleic Acids Res. 2019 Nov 18;47(20):10543-10552
pubmed: 31584075
Mol Phylogenet Evol. 2003 Jan;26(1):1-7
pubmed: 12470932
J Mol Evol. 1995 Sep;41(3):353-8
pubmed: 7563121
Bioinformatics. 2009 Sep 1;25(17):2286-8
pubmed: 19535536
Mitochondrial DNA. 2013 Apr;24(2):105-7
pubmed: 23025509
Mol Phylogenet Evol. 2021 Jun;159:107119
pubmed: 33609704
Mitochondrial DNA B Resour. 2020 Jan 31;5(1):936-937
pubmed: 33366817
BMC Bioinformatics. 2014 Aug 30;15:294
pubmed: 25176556
Sci Rep. 2020 Nov 5;10(1):19123
pubmed: 33154458
Mol Ecol Resour. 2020 Jan;20(1):348-355
pubmed: 31599058
Mol Biol Evol. 2004 Jun;21(6):1095-109
pubmed: 15014145
Genome Biol Evol. 2015 Jul 29;7(8):2321-32
pubmed: 26227816
Insects. 2021 May 24;12(6):
pubmed: 34073787
Proc Biol Sci. 2017 Sep 13;284(1862):
pubmed: 28878063
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):122-3
pubmed: 24491094
Mol Phylogenet Evol. 2019 Feb;131:8-18
pubmed: 30399430
Bioinformatics. 2012 Jun 15;28(12):1647-9
pubmed: 22543367
PLoS One. 2015 Jun 19;10(6):e0129355
pubmed: 26091291
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):3899-3900
pubmed: 25471443
Zootaxa. 2018 Mar 11;4392(3):595-597
pubmed: 29690400
Syst Biol. 2012 May;61(3):539-42
pubmed: 22357727
PLoS One. 2010 Sep 15;5(9):e12708
pubmed: 20856815
PLoS Biol. 2020 Dec 2;18(12):e3001007
pubmed: 33264284
Mol Phylogenet Evol. 2019 Aug;137:236-249
pubmed: 31121308
DNA Cell Biol. 2011 Jan;30(1):3-8
pubmed: 20849253
Mol Biol Evol. 2018 Feb 1;35(2):518-522
pubmed: 29077904
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
Mitochondrial DNA. 2014 Aug;25(4):275-7
pubmed: 23795838
Mol Biol Evol. 2013 Jul;30(7):1720-8
pubmed: 23564938
Mitochondrial DNA B Resour. 2017 May 12;2(1):275-276
pubmed: 33473798
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4561-4562
pubmed: 26540206
Mol Phylogenet Evol. 2014 Oct;79:169-78
pubmed: 24910155
Mitochondrial DNA B Resour. 2021 Aug 16;6(9):2626-2627
pubmed: 34435105
Int J Biol Macromol. 2018 Aug;115:53-60
pubmed: 29540301
Mitochondrial DNA B Resour. 2020 Feb 6;5(1):1062-1064
pubmed: 33366875
PLoS One. 2018 Mar 27;13(3):e0194672
pubmed: 29584761
Mitochondrial DNA B Resour. 2019 Nov 6;4(2):3850-3851
pubmed: 33366217
Mol Phylogenet Evol. 2015 Feb;83:258-77
pubmed: 25091217
Nucleic Acids Res. 2014 Dec 16;42(22):e166
pubmed: 25294837
Trends Ecol Evol. 1999 Oct;14(10):394-398
pubmed: 10481201
Zootaxa. 2019 Aug 07;4652(1):zootaxa.4652.1.6
pubmed: 31716886
Gene. 2016 May 1;581(2):107-16
pubmed: 26802972
Brief Bioinform. 2019 Jul 19;20(4):1160-1166
pubmed: 28968734
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):740-1
pubmed: 24779595
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):931-2
pubmed: 24919505
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):1821-2
pubmed: 25317636
Mol Mar Biol Biotechnol. 1994 Oct;3(5):294-9
pubmed: 7881515
Genomics. 2017 Jul;109(3-4):221-226
pubmed: 28435087
Mitochondrial DNA. 2015 Apr;26(2):247-9
pubmed: 24021007
Nat Methods. 2017 Jun;14(6):587-589
pubmed: 28481363

Auteurs

Xiaomeng Liu (X)

College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou 466001, China.

Mujie Qi (M)

College of Life Sciences, Nankai University, Tianjin 300071, China.

Haizhen Xu (H)

College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou 466001, China.

Zhipeng Wu (Z)

College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou 466001, China.

Lizong Hu (L)

College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou 466001, China.

Mingsheng Yang (M)

College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou 466001, China.

Houhun Li (H)

College of Life Sciences, Nankai University, Tianjin 300071, China.

Classifications MeSH