Evaluation of a novel, rapid antigen detection test for the diagnosis of SARS-CoV-2.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2021
Historique:
received: 09 05 2021
accepted: 20 10 2021
entrez: 29 11 2021
pubmed: 30 11 2021
medline: 15 12 2021
Statut: epublish

Résumé

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causing coronavirus disease 2019 (COVID-19) is currently finally determined in laboratory settings by real-time reverse-transcription polymerase-chain-reaction (rt-PCR). However, simple testing with immediately available results are crucial to gain control over COVID-19. The aim was to evaluate such a point-of-care antigen rapid test (AG-rt) device in its performance compared to laboratory-based rt-PCR testing in COVID-19 suspected, symptomatic patients. For this prospective study, two specimens each of 541 symptomatic female (54.7%) and male (45.3%) patients aged between 18 and 95 years tested at five emergency departments (ED, n = 296) and four primary healthcare centres (PHC, n = 245), were compared, using AG-rt (positive/negative/invalid) and rt-PCR (positive/negative and cycle threshold, Ct) to diagnose SARS-CoV-2. Diagnostic accuracy, sensitivity, specificity, positive predictive values (PPV), negative predictive value (NPV), and likelihood ratios (LR+/-) of the AG-rt were assessed. Differences between ED and PHC were detected regarding gender, age, symptoms, disease prevalence, and diagnostic performance. Overall, 174 (32.2%) were tested positive on AG-rt and 213 (39.4%) on rt-PCR. AG correctly classified 91.7% of all rt-PCR positive cases with a sensitivity of 80.3%, specificity of 99.1%, PPV of 98.3, NPV of 88.6%, LR(+) of 87.8, and LR(-) of 0.20. The highest sensitivities and specificities of AG-rt were detected in PHC (sensitivity: 84.4%, specificity: 100.0%), when using Ct of 30 as cut-off (sensitivity: 92.5%, specificity: 97.8%), and when symptom onset was within the first three days (sensitivity: 82.9%, specificity: 99.6%). The highest sensitivity was detected with a high viral load. Our findings suggest that AG-rt are comparable to rt-PCR to diagnose SARS-CoV-2 in COVID-19 suspected symptomatic patients presenting both at emergency departments and primary health care centres.

Sections du résumé

BACKGROUND
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causing coronavirus disease 2019 (COVID-19) is currently finally determined in laboratory settings by real-time reverse-transcription polymerase-chain-reaction (rt-PCR). However, simple testing with immediately available results are crucial to gain control over COVID-19. The aim was to evaluate such a point-of-care antigen rapid test (AG-rt) device in its performance compared to laboratory-based rt-PCR testing in COVID-19 suspected, symptomatic patients.
METHODS
For this prospective study, two specimens each of 541 symptomatic female (54.7%) and male (45.3%) patients aged between 18 and 95 years tested at five emergency departments (ED, n = 296) and four primary healthcare centres (PHC, n = 245), were compared, using AG-rt (positive/negative/invalid) and rt-PCR (positive/negative and cycle threshold, Ct) to diagnose SARS-CoV-2. Diagnostic accuracy, sensitivity, specificity, positive predictive values (PPV), negative predictive value (NPV), and likelihood ratios (LR+/-) of the AG-rt were assessed.
RESULTS
Differences between ED and PHC were detected regarding gender, age, symptoms, disease prevalence, and diagnostic performance. Overall, 174 (32.2%) were tested positive on AG-rt and 213 (39.4%) on rt-PCR. AG correctly classified 91.7% of all rt-PCR positive cases with a sensitivity of 80.3%, specificity of 99.1%, PPV of 98.3, NPV of 88.6%, LR(+) of 87.8, and LR(-) of 0.20. The highest sensitivities and specificities of AG-rt were detected in PHC (sensitivity: 84.4%, specificity: 100.0%), when using Ct of 30 as cut-off (sensitivity: 92.5%, specificity: 97.8%), and when symptom onset was within the first three days (sensitivity: 82.9%, specificity: 99.6%).
CONCLUSIONS
The highest sensitivity was detected with a high viral load. Our findings suggest that AG-rt are comparable to rt-PCR to diagnose SARS-CoV-2 in COVID-19 suspected symptomatic patients presenting both at emergency departments and primary health care centres.

Identifiants

pubmed: 34843505
doi: 10.1371/journal.pone.0259527
pii: PONE-D-21-15345
pmc: PMC8629250
doi:

Substances chimiques

Antigens, Viral 0

Types de publication

Evaluation Study Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0259527

Déclaration de conflit d'intérêts

The authors have read the journal’s policy and have the following competing interests: Roche Diagnostics provided support for this study in the form of funds sent to the scientific association Science Center Donaustadt, which were used to cover the costs of the test materials and statistician. There are no patents, products in development or marketed products associated with this research to declare. This does not alter our adherence to PLOS ONE policies on sharing data and materials.

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Auteurs

Rainer Thell (R)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

Verena Kallab (V)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

Wolfgang Weinhappel (W)

Primary Health Care Centre Medizin Mariahilf, Vienna, Austria.

Wolfgang Mueckstein (W)

Primary Health Care Centre Medizin Mariahilf, Vienna, Austria.

Lukas Heschl (L)

Primary Health Care Centre Landarztteam, Oed, Austria.

Martina Heschl (M)

Primary Health Care Centre Landarztteam, Oed, Austria.

Stefan Korsatko (S)

Primary Health Care Centre Medius, Graz, Austria.

Franz Toedling (F)

Primary Health Care Centre Praxis Dr Toedling, Probstdorf, Austria.

Amelie Blaschke (A)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

Theresa Herzog (T)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

Anna Klicpera (A)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

Clara Koeller (C)

Emergency Department, Klinik Hietzing, Vienna, Austria.
Semmelweis University Budapest, Hungary.

Moritz Haugk (M)

Wiener Gesundheitsverbund, Vienna, Australia.
Emergency Department, Klinik Hietzing, Vienna, Austria.

Anna Kreil (A)

Wiener Gesundheitsverbund, Vienna, Australia.
Emergency Department, Klinik Landstrasse, Vienna, Austria.

Alexander Spiel (A)

Wiener Gesundheitsverbund, Vienna, Australia.
Emergency Department, Klinik Ottakring, Vienna, Austria.

Philipp Kreuzer (P)

Emergency Department, Univ. Clinic of Internal Medicine, Medical University Graz, Graz, Austria.

Robert Krause (R)

Univ. Clinic of Internal Medicine, Section of Infectiology and Tropical Medicine, Medical University Graz, Graz, Austria.

Christian Sebesta (C)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

Stefan Winkler (S)

Department of Infectiology and Tropical Medicine, University Clinic of Internal Medicine I, Medical University Vienna, Austria.

Brenda Laky (B)

MedSciCare, Vienna, Austria.
Competence Centre Clinical Research, University Clinic of Dentistry, Medical University of Vienna, Vienna, Austria.

Marton Szell (M)

Wiener Gesundheitsverbund, Vienna, Australia.
Department of Internal Medicine 2, Emergency Department, Klinik Donaustadt, Vienna, Austria.

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