Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications.
Animals
Cell Line
Computational Biology
/ methods
Humans
Image Processing, Computer-Assisted
Metadata
Mice
Microscopy, Confocal
/ instrumentation
Microscopy, Fluorescence
/ instrumentation
Mobile Applications
Pattern Recognition, Automated
Programming Languages
Quality Control
Reproducibility of Results
Software
User-Computer Interface
Workflow
Journal
Nature methods
ISSN: 1548-7105
Titre abrégé: Nat Methods
Pays: United States
ID NLM: 101215604
Informations de publication
Date de publication:
12 2021
12 2021
Historique:
received:
01
06
2021
accepted:
30
09
2021
pubmed:
5
12
2021
medline:
8
1
2022
entrez:
4
12
2021
Statut:
ppublish
Résumé
For quality, interpretation, reproducibility and sharing value, microscopy images should be accompanied by detailed descriptions of the conditions that were used to produce them. Micro-Meta App is an intuitive, highly interoperable, open-source software tool that was developed in the context of the 4D Nucleome (4DN) consortium and is designed to facilitate the extraction and collection of relevant microscopy metadata as specified by the recent 4DN-BINA-OME tiered-system of Microscopy Metadata specifications. In addition to substantially lowering the burden of quality assurance, the visual nature of Micro-Meta App makes it particularly suited for training purposes.
Identifiants
pubmed: 34862503
doi: 10.1038/s41592-021-01315-z
pii: 10.1038/s41592-021-01315-z
pmc: PMC8648560
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
1489-1495Subventions
Organisme : NIDA NIH HHS
ID : U01 DA047733
Pays : United States
Organisme : NICHD NIH HHS
ID : P50 HD105352
Pays : United States
Organisme : NIBIB NIH HHS
ID : U01 EB021238
Pays : United States
Organisme : NICHD NIH HHS
ID : P50 HD103573
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM126045
Pays : United States
Organisme : NINDS NIH HHS
ID : P30 NS045892
Pays : United States
Organisme : NCI NIH HHS
ID : U01 CA200059
Pays : United States
Commentaires et corrections
Type : ErratumIn
Informations de copyright
© 2021. The Author(s).
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