Putative Antimicrobial Peptides Within Bacterial Proteomes Affect Bacterial Predominance: A Network Analysis Perspective.
bacterial competition
bioinformatics analysis
interbacterial antagonism
network analysis
putative antimicrobial peptides
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2021
2021
Historique:
received:
03
08
2021
accepted:
11
10
2021
entrez:
6
12
2021
pubmed:
7
12
2021
medline:
7
12
2021
Statut:
epublish
Résumé
The predominance of bacterial taxa in the gut, was examined in view of the putative antimicrobial peptide sequences (AMPs) within their proteomes. The working assumption was that compatible bacteria would share homology and thus immunity to their putative AMPs, while competing taxa would have dissimilarities in their proteome-hidden AMPs. A network-based method ("Bacterial Wars") was developed to handle sequence similarities of predicted AMPs among
Identifiants
pubmed: 34867874
doi: 10.3389/fmicb.2021.752674
pmc: PMC8636115
doi:
Types de publication
Journal Article
Langues
eng
Pagination
752674Informations de copyright
Copyright © 2021 Oulas, Zachariou, Chasapis, Tomazou, Ijaz, Schmartz, Spyrou and Vlamis-Gardikas.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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