Deep Learning Approaches and Applications in Toxicologic Histopathology: Current Status and Future Perspectives.

Deep learning digital image analysis histopathology machine learning preclinical safety toxicologic pathology whole slide imaging

Journal

Journal of pathology informatics
ISSN: 2229-5089
Titre abrégé: J Pathol Inform
Pays: United States
ID NLM: 101528849

Informations de publication

Date de publication:
2021
Historique:
received: 26 05 2021
accepted: 18 07 2021
entrez: 9 12 2021
pubmed: 10 12 2021
medline: 10 12 2021
Statut: epublish

Résumé

Whole slide imaging enables the use of a wide array of digital image analysis tools that are revolutionizing pathology. Recent advances in digital pathology and deep convolutional neural networks have created an enormous opportunity to improve workflow efficiency, provide more quantitative, objective, and consistent assessments of pathology datasets, and develop decision support systems. Such innovations are already making their way into clinical practice. However, the progress of machine learning - in particular, deep learning (DL) - has been rather slower in nonclinical toxicology studies. Histopathology data from toxicology studies are critical during the drug development process that is required by regulatory bodies to assess drug-related toxicity in laboratory animals and its impact on human safety in clinical trials. Due to the high volume of slides routinely evaluated, low-throughput, or narrowly performing DL methods that may work well in small-scale diagnostic studies or for the identification of a single abnormality are tedious and impractical for toxicologic pathology. Furthermore, regulatory requirements around good laboratory practice are a major hurdle for the adoption of DL in toxicologic pathology. This paper reviews the major DL concepts, emerging applications, and examples of DL in toxicologic pathology image analysis. We end with a discussion of specific challenges and directions for future research.

Identifiants

pubmed: 34881097
doi: 10.4103/jpi.jpi_36_21
pii: S2153-3539(22)00164-X
pmc: PMC8609289
doi:

Types de publication

Journal Article Review

Langues

eng

Pagination

42

Informations de copyright

Copyright: © 2021 Journal of Pathology Informatics.

Déclaration de conflit d'intérêts

All authors are employees of AbbVie and may own AbbVie stock.The mention of the vendors in this paper does not imply an endorsement or recommendation.

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Auteurs

Shima Mehrvar (S)

Preclinical Safety, AbbVie Inc., North Chicago, IL, USA.

Lauren E Himmel (LE)

Preclinical Safety, AbbVie Inc., North Chicago, IL, USA.

Pradeep Babburi (P)

Business Technology Solutions, AbbVie Inc., North Chicago, IL, USA.

Andrew L Goldberg (AL)

Business Technology Solutions, AbbVie Inc., North Chicago, IL, USA.

Magali Guffroy (M)

Preclinical Safety, AbbVie Inc., North Chicago, IL, USA.

Kyathanahalli Janardhan (K)

Preclinical Safety, AbbVie Inc., North Chicago, IL, USA.

Amanda L Krempley (AL)

Preclinical Safety, AbbVie Inc., North Chicago, IL, USA.

Bhupinder Bawa (B)

Preclinical Safety, AbbVie Inc., North Chicago, IL, USA.

Classifications MeSH