PCR performance in the SARS-CoV-2 Omicron variant of concern?
Journal
Swiss medical weekly
ISSN: 1424-3997
Titre abrégé: Swiss Med Wkly
Pays: Switzerland
ID NLM: 100970884
Informations de publication
Date de publication:
06 12 2021
06 12 2021
Historique:
entrez:
15
12
2021
pubmed:
16
12
2021
medline:
21
12
2021
Statut:
epublish
Résumé
The new SARS-CoV-2 Omicron variant (B.1.1.529) has been recently declared a Variant of Concern due to a series of important mutations in the viral spike protein and especially in the receptor-binding domain. While investigations into the spread of this new variant are ongoing, the first cases have been detected in Switzerland. Important questions have been raised: (1) Will the PCR assays commonly used to detect SARS-CoV-2 still work for the Omicron variant? (2) Can specific PCR features, e.g. S-gene dropout, be used to identify potential Omicron samples? In this minireview we provide current knowledge on the Omicron variant and guidance on its PCR validation.
Identifiants
pubmed: 34909869
doi: 10.4414/smw.2021.w30120
pii: Swiss Med Wkly. 2021;151:w30120
doi:
pii:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM