Relating Conformational Equilibria to Conformer-Specific Lipophilicities: New Opportunities in Drug Discovery.


Journal

Angewandte Chemie (International ed. in English)
ISSN: 1521-3773
Titre abrégé: Angew Chem Int Ed Engl
Pays: Germany
ID NLM: 0370543

Informations de publication

Date de publication:
07 02 2022
Historique:
received: 02 11 2021
pubmed: 17 12 2021
medline: 22 2 2022
entrez: 16 12 2021
Statut: ppublish

Résumé

Efficient drug discovery is based on a concerted effort in optimizing bioactivity and compound properties such as lipophilicity, and is guided by efficiency metrics that reflect both aspects. While conformation-activity relationships and ligand conformational control are known strategies to improve bioactivity, the use of conformer-specific lipophilicities (logp) is much less explored. Here we show how conformer-specific logp values can be obtained from knowledge of the macroscopic logP value, and of the equilibrium constants between the individual species in water and in octanol. This is illustrated with fluorinated amide rotamers, with integration of rotamer

Identifiants

pubmed: 34913249
doi: 10.1002/anie.202114862
pmc: PMC9304282
doi:

Substances chimiques

Octanols 0
Pharmaceutical Preparations 0
Water 059QF0KO0R

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e202114862

Subventions

Organisme : Fonds Wetenschappelijk Onderzoek
ID : G0F5621N
Organisme : Engineering and Physical Sciences Research Council
ID : EP/M508147/1
Organisme : Engineering and Physical Sciences Research Council
ID : EP/M50662X/1
Organisme : Engineering and Physical Sciences Research Council
ID : EP/P019943/1
Organisme : Engineering and Physical Sciences Research Council
ID : EP/K039466/1
Organisme : AstraZeneca UK

Informations de copyright

© 2021 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.

Références

J Med Chem. 2015 Nov 12;58(21):8315-59
pubmed: 26200936
Chem Res Toxicol. 2011 Sep 19;24(9):1420-56
pubmed: 21790149
Beilstein J Org Chem. 2020 Jul 23;16:1837-1852
pubmed: 32765799
Chem Rev. 2003 Jul;103(7):2475-532
pubmed: 12848578
J Med Chem. 2014 Dec 26;57(24):10257-74
pubmed: 25255204
Nat Chem Biol. 2016 Dec;12(12):1065-1074
pubmed: 27748751
J Med Chem. 2018 Aug 9;61(15):6421-6467
pubmed: 29620890
Nat Rev Drug Discov. 2011 Mar;10(3):197-208
pubmed: 21358739
J Comput Aided Mol Des. 2021 Apr;35(4):399-415
pubmed: 32803515
Future Med Chem. 2019 Jan;11(2):79-82
pubmed: 30648432
Angew Chem Int Ed Engl. 2022 Feb 7;61(7):e202114862
pubmed: 34913249
Biochemistry. 2018 Oct 30;57(43):6132-6143
pubmed: 30277385
Expert Opin Drug Discov. 2010 Mar;5(3):235-48
pubmed: 22823020
J Med Chem. 2018 May 10;61(9):4189-4202
pubmed: 29608068
J Pharm Sci. 1979 Mar;68(3):396-7
pubmed: 423143
J Med Chem. 2021 Apr 22;64(8):4516-4531
pubmed: 33844540
J Med Chem. 2019 Nov 14;62(21):9418-9437
pubmed: 31361481
Drug Discov Today. 2017 Jun;22(6):835-840
pubmed: 27890670
Bioorg Med Chem. 2018 Jul 15;26(11):3006-3015
pubmed: 29655612
J Med Chem. 2018 Aug 9;61(15):6401-6420
pubmed: 29589935
Beilstein J Org Chem. 2010 Apr 20;6:38
pubmed: 20502650
Med Res Rev. 2019 Sep;39(5):1707-1729
pubmed: 30659634
J Med Chem. 2020 Jun 25;63(12):6423-6435
pubmed: 31913040
J Med Chem. 1991 Apr;34(4):1272-5
pubmed: 2016703
J Org Chem. 2017 Jan 20;82(2):1285-1290
pubmed: 28029787
Chem Sci. 2015 Dec 1;6(12):6725-6730
pubmed: 30154996
Angew Chem Int Ed Engl. 2016 Jan 11;55(2):674-8
pubmed: 26592706
J Med Chem. 2018 Jul 26;61(14):5822-5880
pubmed: 29400967
Chimia (Aarau). 2014;68(6):356-62
pubmed: 25198745
Chem Biodivers. 2009 Aug;6(8):1152-69
pubmed: 19697333
Chem Commun (Camb). 2009 Jul 14;(26):3961-3
pubmed: 19662266
J Chem Inf Model. 2018 May 29;58(5):1005-1020
pubmed: 29717870
J Med Chem. 2003 May 22;46(11):2241-5
pubmed: 12747795
Drug Discov Today Technol. 2018 Jul;27:65-70
pubmed: 30103865
Org Lett. 2018 Sep 21;20(18):5737-5742
pubmed: 30207734
J Med Chem. 2020 Nov 12;63(21):12156-12170
pubmed: 32633947

Auteurs

Bruno Linclau (B)

School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.
Department of Organic and Macromolecular Chemistry, Ghent University, Campus Sterre, S4, Krijgslaan 281, 9000, Ghent, Belgium.

Zhong Wang (Z)

School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.

Benjamin Jeffries (B)

School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, UK.

Jérôme Graton (J)

CEISAM UMR CNRS 6230, Université de Nantes, CNRS, CEISAM UMR 6230, 44000, Nantes, France.

Rodrigo J Carbajo (RJ)

Medicinal Chemistry, Oncology R&D, AstraZeneca, Cambridge, CB4 0WG, UK.

Davy Sinnaeve (D)

Univ. Lille, Inserm, Institut Pasteur de Lille, CHU Lille, U1167-RID-AGE-Risk Factors and Molecular, Determinants of Aging-Related Diseases, 59000, Lille, France.
CNRS, ERL9002-Integrative Structural Biology, 59000, Lille, France.

Jean-Yves Le Questel (JY)

CEISAM UMR CNRS 6230, Université de Nantes, CNRS, CEISAM UMR 6230, 44000, Nantes, France.

James S Scott (JS)

Medicinal Chemistry, Oncology R&D, AstraZeneca, Cambridge, CB4 0WG, UK.

Elisabetta Chiarparin (E)

Medicinal Chemistry, Oncology R&D, AstraZeneca, Cambridge, CB4 0WG, UK.

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