Computed tomography radiomics for the prediction of thymic epithelial tumor histology, TNM stage and myasthenia gravis.
Adult
Aged
Aged, 80 and over
Algorithms
Female
Follow-Up Studies
Histological Techniques
/ methods
Humans
Machine Learning
Male
Middle Aged
Myasthenia Gravis
/ diagnostic imaging
Neoplasm Staging
Neoplasms, Glandular and Epithelial
/ diagnostic imaging
Retrospective Studies
Thymus Neoplasms
/ diagnostic imaging
Tomography, X-Ray Computed
/ methods
Young Adult
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2021
2021
Historique:
received:
12
06
2021
accepted:
01
12
2021
entrez:
20
12
2021
pubmed:
21
12
2021
medline:
11
1
2022
Statut:
epublish
Résumé
To evaluate CT-derived radiomics for machine learning-based classification of thymic epithelial tumor (TET) stage (TNM classification), histology (WHO classification) and the presence of myasthenia gravis (MG). Patients with histologically confirmed TET in the years 2000-2018 were retrospectively included, excluding patients with incompatible imaging or other tumors. CT scans were reformatted uniformly, gray values were normalized and discretized. Tumors were segmented manually; 15 scans were re-segmented after 2 weeks by two readers. 1316 radiomic features were calculated (pyRadiomics). Features with low intra-/inter-reader agreement (ICC<0.75) were excluded. Repeated nested cross-validation was used for feature selection (Boruta algorithm), model training, and evaluation (out-of-fold predictions). Shapley additive explanation (SHAP) values were calculated to assess feature importance. 105 patients undergoing surgery for TET were identified. After applying exclusion criteria, 62 patients (28 female; mean age, 57±14 years; range, 22-82 years) with 34 low-risk TET (LRT; WHO types A/AB/B1), 28 high-risk TET (HRT; WHO B2/B3/C) in early stage (49, TNM stage I-II) or advanced stage (13, TNM III-IV) were included. 14(23%) of the patients had MG. 334(25%) features were excluded after intra-/inter-reader analysis. Discriminatory performance of the random forest classifiers was good for histology(AUC, 87.6%; 95% confidence interval, 76.3-94.3) and TNM stage(AUC, 83.8%; 95%CI, 66.9-93.4) but poor for the prediction of MG (AUC, 63.9%; 95%CI, 44.8-79.5). CT-derived radiomic features may be a useful imaging biomarker for TET histology and TNM stage.
Identifiants
pubmed: 34928978
doi: 10.1371/journal.pone.0261401
pii: PONE-D-21-19370
pmc: PMC8687592
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0261401Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
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