Evidence for the Association between the Intronic Haplotypes of Ionotropic Glutamate Receptors and First-Episode Schizophrenia.

BrainAGE SNP genetic variations haplotypes intron ionotropic glutamate receptor schizophrenia scoring model

Journal

Journal of personalized medicine
ISSN: 2075-4426
Titre abrégé: J Pers Med
Pays: Switzerland
ID NLM: 101602269

Informations de publication

Date de publication:
25 Nov 2021
Historique:
received: 31 08 2021
revised: 14 11 2021
accepted: 16 11 2021
entrez: 24 12 2021
pubmed: 25 12 2021
medline: 25 12 2021
Statut: epublish

Résumé

The heritable component of schizophrenia (SCH) as a polygenic trait is represented by numerous variants from a heterogeneous group of genes each contributing a relatively small effect. Various SNPs have already been found and analyzed in genes encoding the NMDAR subunits. However, less is known about genetic variations of genes encoding the AMPA and kainate receptor subunits. We analyzed sixteen iGluR genes in full length to determine the sequence variability of iGluR genes. Our aim was to describe the rate of genetic variability, its distribution, and the co-occurrence of variants and to identify new candidate risk variants or haplotypes. The cumulative effect of genetic risk was then estimated using a simple scoring model.

Identifiants

pubmed: 34945722
pii: jpm11121250
doi: 10.3390/jpm11121250
pmc: PMC8708351
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Ministerstvo Školství, Mládeže a Tělovýchovy
ID : LTAUSA19122
Organisme : Grantová Agentura České Republiky
ID : 20-179458
Organisme : Technologická Agentura České Republiky
ID : TN01000013
Organisme : Ministerstvo Školství, Mládeže a Tělovýchovy
ID : CZ.02.1.01/0.0/0.0/16_025/0007444
Organisme : Grantová Agentura, Univerzita Karlova
ID : 1206218
Organisme : Agentura Pro Zdravotnický Výzkum České Republiky
ID : NU21-04-00405

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Auteurs

Katerina Hirschfeldova (K)

Institute of Biology and Medical Genetics, First Faculty of Medicine, Charles University, 12800 Prague, Czech Republic.
Institute of Physiology, Czech Academy of Sciences, 14220 Prague, Czech Republic.

Jiri Cerny (J)

Institute of Physiology, Czech Academy of Sciences, 14220 Prague, Czech Republic.
Institute of Biotechnology, Czech Academy of Sciences, BIOCEV, 25250 Vestec, Czech Republic.

Paulina Bozikova (P)

Institute of Biotechnology, Czech Academy of Sciences, BIOCEV, 25250 Vestec, Czech Republic.

Viktor Kuchtiak (V)

Institute of Physiology, Czech Academy of Sciences, 14220 Prague, Czech Republic.
Faculty of Science, Charles University, 12800 Prague, Czech Republic.

Tobias Rausch (T)

Genomics Core Facility, EMBL, 69117 Heidelberg, Germany.

Vladimir Benes (V)

Genomics Core Facility, EMBL, 69117 Heidelberg, Germany.

Filip Spaniel (F)

The National Institute of Mental Health, 25067 Klecany, Czech Republic.

David Gregus (D)

The National Institute of Mental Health, 25067 Klecany, Czech Republic.

Jiri Horacek (J)

The National Institute of Mental Health, 25067 Klecany, Czech Republic.

Ladislav Vyklicky (L)

Institute of Physiology, Czech Academy of Sciences, 14220 Prague, Czech Republic.

Ales Balik (A)

Institute of Physiology, Czech Academy of Sciences, 14220 Prague, Czech Republic.
Institute of Physiology, Czech Academy of Sciences, BIOCEV, 25250 Vestec, Czech Republic.

Classifications MeSH