Biofilm Interaction Mapping and Analysis (BIMA) of Interspecific Interactions in

biofilm consortia exometabolomics mass spectrometry metabolomics microbial interaction morphology mutant fitness profiling

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2021
Historique:
received: 12 08 2021
accepted: 04 11 2021
entrez: 27 12 2021
pubmed: 28 12 2021
medline: 28 12 2021
Statut: epublish

Résumé

Pseudomonas species are ubiquitous in nature and include numerous medically, agriculturally and technologically beneficial strains of which the interspecific interactions are of great interest for biotechnologies. Specifically, co-cultures containing

Identifiants

pubmed: 34956122
doi: 10.3389/fmicb.2021.757856
pmc: PMC8696352
doi:

Types de publication

Journal Article

Langues

eng

Pagination

757856

Informations de copyright

Copyright © 2021 Kosina, Rademacher, Wetmore, de Raad, Zemla, Zane, Zulovich, Chakraborty, Bowen, Wall, Auer, Arkin, Deutschbauer and Northen.

Déclaration de conflit d'intérêts

MR and MZ, currently employed at DiCe Molecules and Molecular Devices, respectively, were not employed there at the time of the study. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Suzanne M Kosina (SM)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Peter Rademacher (P)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Kelly M Wetmore (KM)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Markus de Raad (M)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Marcin Zemla (M)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Grant M Zane (GM)

Department of Biochemistry, University of Missouri, Columbia, MO, United States.

Jennifer J Zulovich (JJ)

Department of Biochemistry, University of Missouri, Columbia, MO, United States.

Romy Chakraborty (R)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Benjamin P Bowen (BP)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.
Lawrence Berkeley National Laboratory, Joint Genome Institute, Berkeley, CA, United States.

Judy D Wall (JD)

Department of Biochemistry, University of Missouri, Columbia, MO, United States.

Manfred Auer (M)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Adam P Arkin (AP)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Adam M Deutschbauer (AM)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.

Trent R Northen (TR)

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, United States.
Lawrence Berkeley National Laboratory, Joint Genome Institute, Berkeley, CA, United States.

Classifications MeSH