The 2022 Nucleic Acids Research database issue and the online molecular biology database collection.
Journal
Nucleic acids research
ISSN: 1362-4962
Titre abrégé: Nucleic Acids Res
Pays: England
ID NLM: 0411011
Informations de publication
Date de publication:
07 01 2022
07 01 2022
Historique:
entrez:
6
1
2022
pubmed:
7
1
2022
medline:
15
1
2022
Statut:
ppublish
Résumé
The 2022 Nucleic Acids Research Database Issue contains 185 papers, including 87 papers reporting on new databases and 85 updates from resources previously published in the Issue. Thirteen additional manuscripts provide updates on databases most recently published elsewhere. Seven new databases focus specifically on COVID-19 and SARS-CoV-2, including SCoV2-MD, the first of the Issue's Breakthrough Articles. Major nucleic acid databases reporting updates include MODOMICS, JASPAR and miRTarBase. The AlphaFold Protein Structure Database, described in the second Breakthrough Article, is the stand-out in the protein section, where the Human Proteoform Atlas and GproteinDb are other notable new arrivals. Updates from DisProt, FuzDB and ELM comprehensively cover disordered proteins. Under the metabolism and signalling section Reactome, ConsensusPathDB, HMDB and CAZy are major returning resources. In microbial and viral genomes taxonomy and systematics are well covered by LPSN, TYGS and GTDB. Genomics resources include Ensembl, Ensembl Genomes and UCSC Genome Browser. Major returning pharmacology resource names include the IUPHAR/BPS guide and the Therapeutic Target Database. New plant databases include PlantGSAD for gene lists and qPTMplants for post-translational modifications. The entire Database Issue is freely available online on the Nucleic Acids Research website (https://academic.oup.com/nar). Our latest update to the NAR online Molecular Biology Database Collection brings the total number of entries to 1645. Following last year's major cleanup, we have updated 317 entries, listing 89 new resources and trimming 80 discontinued URLs. The current release is available at http://www.oxfordjournals.org/nar/database/c/.
Identifiants
pubmed: 34986604
pii: 6495890
doi: 10.1093/nar/gkab1195
pmc: PMC8728296
doi:
Substances chimiques
Proteome
0
Types de publication
Editorial
Introductory Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
D1-D10Subventions
Organisme : Oxford University Press
Informations de copyright
© The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research.
Références
Nucleic Acids Res. 2020 Jan 8;48(D1):D570-D578
pubmed: 31696235
Nucleic Acids Res. 2022 Jan 7;50(D1):D1508-D1514
pubmed: 34643700
Nucleic Acids Res. 2022 Jan 7;50(D1):D371-D379
pubmed: 34761274
Nucleic Acids Res. 2022 Jan 7;50(D1):D1139-D1146
pubmed: 34500460
Nucleic Acids Res. 2022 Jan 7;50(D1):D1432-D1441
pubmed: 34755871
Nucleic Acids Res. 2022 Jan 7;50(D1):D326-D332
pubmed: 34718726
Nucleic Acids Res. 2022 Jan 7;50(D1):D211-D221
pubmed: 34570238
Nucleic Acids Res. 2022 Jan 7;50(D1):D1200-D1207
pubmed: 34634800
Nucleic Acids Res. 2022 Jan 7;50(D1):D1262-D1272
pubmed: 34875068
Bioinformatics. 2015 Mar 15;31(6):926-32
pubmed: 25398609
Nucleic Acids Res. 2022 Jan 7;50(D1):D380-D386
pubmed: 34570235
Nucleic Acids Res. 2018 Jan 4;46(D1):D1003-D1010
pubmed: 29059408
Nucleic Acids Res. 2022 Jan 7;50(D1):D1324-D1333
pubmed: 34664659
Nucleic Acids Res. 2022 Jan 7;50(D1):D1172-D1178
pubmed: 34718716
Database (Oxford). 2021 Apr 21;2021:
pubmed: 33882120
Nucleic Acids Res. 2022 Jan 7;50(D1):D996-D1003
pubmed: 34791415
Nucleic Acids Res. 2022 Jan 7;50(D1):D480-D487
pubmed: 34850135
Nucleic Acids Res. 2017 Jan 4;45(D1):D581-D591
pubmed: 27903906
Nucleic Acids Res. 2022 Jan 7;50(D1):D231-D235
pubmed: 34893873
Nucleic Acids Res. 2022 Jan 7;50(D1):D587-D595
pubmed: 34850110
Nucleic Acids Res. 2022 Jan 7;50(D1):D347-D355
pubmed: 34718734
Nature. 2021 Aug;596(7873):590-596
pubmed: 34293799
Nucleic Acids Res. 2022 Jan 7;50(D1):D1231-D1237
pubmed: 34534336
Nucleic Acids Res. 2022 Jan 7;50(D1):D27-D38
pubmed: 34718731
Nucleic Acids Res. 2015 Jan;43(Database issue):D707-13
pubmed: 25510499
Nucleic Acids Res. 2022 Jan 7;50(D1):D1541-D1552
pubmed: 34791421
Nucleic Acids Res. 2022 Jan 7;50(D1):D534-D542
pubmed: 34755867
Nucleic Acids Res. 2022 Jan 7;50(D1):D1522-D1527
pubmed: 34871441
Nucleic Acids Res. 2022 Jan 7;50(D1):D1442-D1447
pubmed: 34723326
Nucleic Acids Res. 2022 Jan 7;50(D1):D1069-D1076
pubmed: 34664660
Nucleic Acids Res. 2022 Jan 7;50(D1):D11-D19
pubmed: 34850134
Nucleic Acids Res. 2022 Jan 7;50(D1):D765-D770
pubmed: 34634797
Nucleic Acids Res. 2022 Jan 7;50(D1):D1456-D1467
pubmed: 34534340
Nucleic Acids Res. 2021 Jan 8;49(D1):D192-D200
pubmed: 33211869
Nucleic Acids Res. 2021 Jan 8;49(D1):D344-D354
pubmed: 33156333
Nucleic Acids Res. 2022 Jan 7;50(D1):D365-D370
pubmed: 34508354
Nucleic Acids Res. 2022 Jan 7;50(D1):D943-D949
pubmed: 34634795
Nucleic Acids Res. 2022 Jan 7;50(D1):D1040-D1045
pubmed: 34792158
Nucleic Acids Res. 2022 Jan 7;50(D1):D687-D692
pubmed: 34788843
Nucleic Acids Res. 2022 Jan 7;50(D1):D356-D364
pubmed: 34643729
Nucleic Acids Res. 2022 Jan 7;50(D1):D333-D339
pubmed: 34551440
Nucleic Acids Res. 2022 Jan 7;50(D1):D795-D800
pubmed: 34500458
Nucleic Acids Res. 2022 Jan 7;50(D1):D1273-D1281
pubmed: 34747487
Nucleic Acids Res. 2021 Jan 8;49(D1):D121-D124
pubmed: 33166387
Nucleic Acids Res. 2022 Jan 7;50(D1):D747-D757
pubmed: 34554255
Nucleic Acids Res. 2022 Jan 7;50(D1):D1398-D1407
pubmed: 34718717
Nucleic Acids Res. 2022 Jan 7;50(D1):D1491-D1499
pubmed: 34718741
Nature. 2021 Aug;596(7873):583-589
pubmed: 34265844
Nucleic Acids Res. 2022 Jan 7;50(D1):D648-D653
pubmed: 34761267
Nucleic Acids Res. 2021 Jan 8;49(D1):D884-D891
pubmed: 33137190
Nucleic Acids Res. 2022 Jan 7;50(D1):D1100-D1108
pubmed: 34634815
Nucleic Acids Res. 2022 Jan 7;50(D1):D439-D444
pubmed: 34791371
Nat Rev Drug Discov. 2018 May;17(5):317-332
pubmed: 29472638
Nucleic Acids Res. 2022 Jan 7;50(D1):D1475-D1482
pubmed: 34554254
Nucleic Acids Res. 2022 Jan 7;50(D1):D20-D26
pubmed: 34850941
Nucleic Acids Res. 2022 Jan 7;50(D1):D1535-D1540
pubmed: 34718696
Nucleic Acids Res. 2022 Jan 7;50(D1):D934-D942
pubmed: 34634807
Nucleic Acids Res. 2022 Jan 7;50(D1):D1216-D1220
pubmed: 34718739
Nucleic Acids Res. 2022 Jan 7;50(D1):D801-D807
pubmed: 34634793
Nucleic Acids Res. 2022 Jan 7;50(D1):D1334-D1339
pubmed: 34718715
Nucleic Acids Res. 2022 Jan 7;50(D1):D654-D664
pubmed: 34643709
Nucleic Acids Res. 2021 Jan 8;49(D1):D325-D334
pubmed: 33290552
Nucleic Acids Res. 2021 Jan 8;49(D1):D545-D551
pubmed: 33125081
Nucleic Acids Res. 2022 Jan 7;50(D1):D912-D917
pubmed: 34850947
Nucleic Acids Res. 2022 Jan 7;50(D1):D1184-D1199
pubmed: 34570230
Nucleic Acids Res. 2022 Jan 7;50(D1):D1115-D1122
pubmed: 34718705
Nucleic Acids Res. 2022 Jan 7;50(D1):D1010-D1015
pubmed: 34718735
Nucleic Acids Res. 2022 Jan 7;50(D1):D1147-D1155
pubmed: 34643725
BMC Bioinformatics. 2011 Sep 30;12:385
pubmed: 21961884
Nucleic Acids Res. 2022 Jan 7;50(D1):D1164-D1171
pubmed: 34634794
Nucleic Acids Res. 2022 Jan 7;50(D1):D141-D149
pubmed: 34755879
Nucleic Acids Res. 2022 Jan 7;50(D1):D785-D794
pubmed: 34520557
Nucleic Acids Res. 2022 Jan 7;50(D1):D1468-D1474
pubmed: 34747486
Nucleic Acids Res. 2022 Jan 7;50(D1):D518-D525
pubmed: 34570219
Nucleic Acids Res. 2022 Jan 7;50(D1):D1091-D1099
pubmed: 34643708
Nucleic Acids Res. 2022 Jan 7;50(D1):D571-D577
pubmed: 34850161
Nucleic Acids Res. 2022 Jan 7;50(D1):D837-D847
pubmed: 34788826
Nucleic Acids Res. 2022 Jan 7;50(D1):D497-D508
pubmed: 34718738
Nucleic Acids Res. 2022 Jan 7;50(D1):D222-D230
pubmed: 34850920
Nucleic Acids Res. 2022 Jan 7;50(D1):D1408-D1416
pubmed: 34570217
Nucleic Acids Res. 2022 Jan 7;50(D1):D867-D874
pubmed: 34634820
Nucleic Acids Res. 2022 Jan 7;50(D1):D771-D776
pubmed: 34643704
Nucleic Acids Res. 2018 Jan 4;46(D1):D288-D295
pubmed: 29161430
Nucleic Acids Res. 2022 Jan 7;50(D1):D808-D816
pubmed: 34718713
Nucleic Acids Res. 2022 Jan 7;50(D1):D898-D911
pubmed: 34718728
Nucleic Acids Res. 2021 Jan 8;49(D1):D480-D489
pubmed: 33237286
Nucleic Acids Res. 2022 Jan 7;50(D1):D988-D995
pubmed: 34791404
Nucleic Acids Res. 2022 Jan 7;50(D1):D509-D517
pubmed: 34791357
Nucleic Acids Res. 2022 Jan 7;50(D1):D543-D552
pubmed: 34723319
Nucleic Acids Res. 2020 Jan 8;48(D1):D1145-D1152
pubmed: 31686107
Nucleic Acids Res. 2022 Jan 7;50(D1):D1244-D1254
pubmed: 34606616
Nucleic Acids Res. 2020 Jan 8;48(D1):D77-D83
pubmed: 31665515
Nucleic Acids Res. 2022 Jan 7;50(D1):D1528-D1534
pubmed: 34606614
Nucleic Acids Res. 2022 Jan 7;50(D1):D883-D887
pubmed: 34396391
Nucleic Acids Res. 2022 Jan 7;50(D1):D578-D586
pubmed: 34718729
Nucleic Acids Res. 2022 Jan 7;50(D1):D1032-D1039
pubmed: 34747465
Nucleic Acids Res. 2022 Jan 7;50(D1):D888-D897
pubmed: 34634813
Nucleic Acids Res. 2022 Jan 7;50(D1):D1282-D1294
pubmed: 34718737
Proteins. 2021 Dec;89(12):1687-1699
pubmed: 34218458
Nucleic Acids Res. 2022 Jan 7;50(D1):D980-D987
pubmed: 34791407
Nucleic Acids Res. 2022 Jan 7;50(D1):D858-D866
pubmed: 34761257
Nucleic Acids Res. 2022 Jan 7;50(D1):D165-D173
pubmed: 34850907
Nucleic Acids Res. 2022 Jan 7;50(D1):D950-D955
pubmed: 34723317
Nucleic Acids Res. 2022 Jan 7;50(D1):D340-D346
pubmed: 34718740
Nucleic Acids Res. 2022 Jan 7;50(D1):D391-D401
pubmed: 34718747
Nucleic Acids Res. 2022 Jan 7;50(D1):D729-D735
pubmed: 34747470