Stratifying individuals into non-alcoholic fatty liver disease risk levels using time series machine learning models.


Journal

Journal of biomedical informatics
ISSN: 1532-0480
Titre abrégé: J Biomed Inform
Pays: United States
ID NLM: 100970413

Informations de publication

Date de publication:
02 2022
Historique:
received: 31 08 2021
revised: 01 12 2021
accepted: 03 01 2022
pubmed: 11 1 2022
medline: 17 3 2022
entrez: 10 1 2022
Statut: ppublish

Résumé

Non-alcoholic fatty liver disease (NAFLD) affects 25% of the population worldwide, and its prevalence is anticipated to increase globally. While most NAFLD patients are asymptomatic, NAFLD may progress to fibrosis, cirrhosis, cardiovascular disease, and diabetes. Research reports, with daunting results, show the challenge that NAFLD's burden causes to global population health. The current process for identifying fibrosis risk levels is inefficient, expensive, does not cover all potential populations, and does not identify the risk in time. Instead of invasive liver biopsies, we implemented a non-invasive fibrosis assessment process calculated from clinical data (accessed via EMRs/EHRs). We stratified patients' risks for fibrosis from 2007 to 2017 by modeling the risk in 5579 individuals. The process involved time-series machine learning models (Hidden Markov Models and Group-Based Trajectory Models) profiled fibrosis risk by modeling patients' latent medical status resulted in three groups. The high-risk group had abnormal lab test values and a higher prevalence of chronic conditions. This study can help overcome the inefficient, traditional process of detecting fibrosis via biopsies (that are also medically unfeasible due to their invasive nature, the medical resources involved, and costs) at early stages. Thus longitudinal risk assessment may be used to make population-specific medical recommendations targeting early detection of high risk patients, to avoid the development of fibrosis disease and its complications as well as decrease healthcare costs.

Identifiants

pubmed: 35007752
pii: S1532-0464(22)00002-8
doi: 10.1016/j.jbi.2022.103986
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

103986

Informations de copyright

Copyright © 2022 Elsevier Inc. All rights reserved.

Auteurs

Ofir Ben-Assuli (O)

Faculty of Business Administration, Ono Academic College, 104 Zahal Street, Kiryat Ono 55000, Israel. Electronic address: ofir@ono.ac.il.

Arie Jacobi (A)

Faculty of Business Administration, Ono Academic College, 104 Zahal Street, Kiryat Ono 55000, Israel; Faculty of Business Administration, Peres Academic Center, 10 Shimon Peres Street, Rehovot, 7610202, Israel. Electronic address: jacobi.arie@ono.ac.il.

Orit Goldman (O)

Faculty of Business Administration, Ono Academic College, 104 Zahal Street, Kiryat Ono 55000, Israel. Electronic address: oritgol@bezeqint.net.

Shani Shenhar-Tsarfaty (S)

Departments of Internal Medicine "C", "D" and "E", Tel-Aviv Sourasky Medical Center, Sackler Faculty of Medicine, Tel-Aviv University, Weizmann 6 St., Tel Aviv, Israel. Electronic address: shanis@tlvmc.gov.il.

Ori Rogowski (O)

Departments of Internal Medicine "C", "D" and "E", Tel-Aviv Sourasky Medical Center, Sackler Faculty of Medicine, Tel-Aviv University, Weizmann 6 St., Tel Aviv, Israel. Electronic address: orir@tlvmc.gov.il.

David Zeltser (D)

Departments of Internal Medicine "C", "D" and "E", Tel-Aviv Sourasky Medical Center, Sackler Faculty of Medicine, Tel-Aviv University, Weizmann 6 St., Tel Aviv, Israel. Electronic address: davidz@tlvmc.gov.il.

Itzhak Shapira (I)

Departments of Internal Medicine "C", "D" and "E", Tel-Aviv Sourasky Medical Center, Sackler Faculty of Medicine, Tel-Aviv University, Weizmann 6 St., Tel Aviv, Israel. Electronic address: shapira@tlvmc.gov.il.

Shlomo Berliner (S)

Departments of Internal Medicine "C", "D" and "E", Tel-Aviv Sourasky Medical Center, Sackler Faculty of Medicine, Tel-Aviv University, Weizmann 6 St., Tel Aviv, Israel. Electronic address: berliners@tlvmc.gov.il.

Shira Zelber-Sagi (S)

School of Public Health, University of Haifa, 3498838 Haifa, Israel; Department of Gastroenterology, Tel Aviv Medical Center, 6423906 Tel Aviv, Israel. Electronic address: zelbersagi@bezeqint.net.

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