Metaproteomics Approach and Pathway Modulation in Obesity and Diabetes: A Narrative Review.


Journal

Nutrients
ISSN: 2072-6643
Titre abrégé: Nutrients
Pays: Switzerland
ID NLM: 101521595

Informations de publication

Date de publication:
23 Dec 2021
Historique:
received: 28 10 2021
revised: 20 12 2021
accepted: 21 12 2021
entrez: 11 1 2022
pubmed: 12 1 2022
medline: 27 1 2022
Statut: epublish

Résumé

Low-grade inflammatory diseases revealed metabolic perturbations that have been linked to various phenotypes, including gut microbiota dysbiosis. In the last decade, metaproteomics has been used to investigate protein composition profiles at specific steps and in specific healthy/pathologic conditions. We applied a rigorous protocol that relied on PRISMA guidelines and filtering criteria to obtain an exhaustive study selection that finally resulted in a group of 10 studies, based on metaproteomics and that aim at investigating obesity and diabetes. This batch of studies was used to discuss specific microbial and human metaproteome alterations and metabolic patterns in subjects affected by diabetes (T1D and T2D) and obesity. We provided the main up- and down-regulated protein patterns in the inspected pathologies. Despite the available results, the evident paucity of metaproteomic data is to be considered as a limiting factor in drawing objective considerations. To date, ad hoc prepared metaproteomic databases collecting pathologic data and related metadata, together with standardized analysis protocols, are required to increase our knowledge on these widespread pathologies.

Identifiants

pubmed: 35010920
pii: nu14010047
doi: 10.3390/nu14010047
pmc: PMC8746330
pii:
doi:

Substances chimiques

Bacterial Proteins 0

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : BIOMIS project funded by PON RICERCA E INNOVAZIONE 2014-2020
ID : ARS01_01220
Organisme : Federal Ministry of Food and Agriculture (BMEL) through the Federal Office for Agriculture and Food
ID : 2819ERA10F
Organisme : University and Research (MIUR), Ministry of agricultural, food and forestry policies
ID : MiPAAF
Organisme : Institut National de recherche pour l'Agriculture, l'Alimentation et l'Environnement
ID : INRAE
Organisme : European Joint Programming Initiative: "A Healthy Diet for a Healthy Life"
ID : 696300

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Auteurs

Francesco Maria Calabrese (FM)

Department of Soil, Plant and Food Science, Aldo Moro University, Bari, Via G. Amendola 165/a, 70126 Bari, Italy.

Annalisa Porrelli (A)

Department of Soil, Plant and Food Science, Aldo Moro University, Bari, Via G. Amendola 165/a, 70126 Bari, Italy.

Mirco Vacca (M)

Department of Soil, Plant and Food Science, Aldo Moro University, Bari, Via G. Amendola 165/a, 70126 Bari, Italy.

Blandine Comte (B)

INRAE, UNH, Metabolism Exploration Platform, MetaboHUB Clermont, Clermont Auvergne University, F-63000 Clermont-Ferrand, France.

Katharina Nimptsch (K)

Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Molecular Epidemiology Research Group, 13125 Berlin, Germany.

Mariona Pinart (M)

Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Molecular Epidemiology Research Group, 13125 Berlin, Germany.

Tobias Pischon (T)

Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Molecular Epidemiology Research Group, 13125 Berlin, Germany.
Charité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, 10117 Berlin, Germany.
German Centre for Cardiovascular Research (DZHK), Partner Site Berlin, 10785 Berlin, Germany.
Biobank Technology Platform, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), 13125 Berlin, Germany.
Biobank Core Facility, Berlin Institute of Health at Charité-Universitätsmedizin Berlin, 10178 Berlin, Germany.

Estelle Pujos-Guillot (E)

INRAE, UNH, Metabolism Exploration Platform, MetaboHUB Clermont, Clermont Auvergne University, F-63000 Clermont-Ferrand, France.

Maria De Angelis (M)

Department of Soil, Plant and Food Science, Aldo Moro University, Bari, Via G. Amendola 165/a, 70126 Bari, Italy.

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Classifications MeSH