[The first data challenge of the french society of pathology: An international competition in 2020, a research tool in A.I. for the future?]

Le premier data challenge organisé par la Société Française de Pathologie : une compétition internationale en 2020, un outil de recherche en intelligence artificielle pour l’avenir ?
Artificial intelligence Col utérin Data challenge Intelligence artificielle Lames virtuelles Uterine cervix Whole slide images

Journal

Annales de pathologie
ISSN: 0242-6498
Titre abrégé: Ann Pathol
Pays: France
ID NLM: 8106337

Informations de publication

Date de publication:
Mar 2022
Historique:
received: 20 05 2021
revised: 08 09 2021
accepted: 09 10 2021
pubmed: 12 1 2022
medline: 13 4 2022
entrez: 11 1 2022
Statut: ppublish

Résumé

The french society of pathology (SFP) organized in 2020 its first data challenge with the help of Health Data Hub (HDH). The organisation of this event first consisted in recruiting almost 5000 slides of uterus cervical biopsies obtained in 20 pathology centers. After having made sure that patients did not refuse to include their slides in the project, the slides were anonymised, digitized and annotated by expert pathologists, and were finally uploaded on a data challenge platform for competitors all around the world. Competitors teams had to develop algorithms that could distinguish among four diagnostic classes in epithelial lesions of uterine cervix. Among many submissions by competitors, the best algorithms obtained an overall score close to 95%. The best 3 teams shared 25k€ prizes during a special session organised during the national congress of the SFP. The final part of the competition lasted only 6 weeks and the goal of SFP and HDH is now to allow for the collection to be published in open access. This final step will allow data scientists and pathologists to further develop artificial intelligence algorithms in this medical area.

Identifiants

pubmed: 35012784
pii: S0242-6498(21)00246-7
doi: 10.1016/j.annpat.2021.10.002
pii:
doi:

Types de publication

Journal Article

Langues

fre

Sous-ensembles de citation

IM

Pagination

119-128

Informations de copyright

Copyright © 2021. Published by Elsevier Masson SAS.

Auteurs

Agathe Delaune (A)

Plateforme de données de santé-Health Data Hub, 9, rue Georges Pitard 75015 Paris, France.

Séverine Valmary-Degano (S)

Pathologie, université Grenoble Alpes, Inserm U1209, CNRS UMR5309, institute for Advanced Biosciences, CHU Grenoble, 38000, France.

Nicolas Loménie (N)

LIPADE, UFR mathématiques-informatiques, université de Paris, 45, rue des Saints-Pères, 75006 Paris, France.

Karim Zryouil (K)

Capgemini Invent, 147, quai du Président Roosevelt, 92130 Issy-les-Moulineaux, France.

Nesrine Benyahia (N)

Dr Data, 81, rue Réaumur, 75002 Paris, France.

Olivier Trassard (O)

Pathologie/Inserm, CHU Bicêtre, AP-HP, 78, rue du Général Leclerc, 94270 Le Kremlin-Bicêtre, France.

Virginie Eraville (V)

Société française de pathologie, Paris, France.

Christine Bergeron (C)

CerbaPath, 16 bis rue Odessa 75014 Paris, France.

Mojgan Devouassoux-Shisheboran (M)

Centre de Pathologie Sud des Hospices Civils de Lyon, Centre Hospitalier Lyon Sud, 165, chemin du grand Revoyet, 69495 Pierre Bénite Cedex, France.

Claire Glaser (C)

Pathologie, CHG Versailles, 177, rue de Versailles, 78150 Le Chesnay-Rocquencourt, France.

Guillaume Bataillon (G)

Pathologie, institut Curie, 26, r Ulm, 75005 Paris, France.

Emmanuel Bacry (E)

Plateforme de données de santé-Health Data Hub et CNRS, université Paris Dauphine, PSL, 9 rue Georges Pitard, 75015 Paris, France.

Stéphanie Combes (S)

Plateforme de données de santé -Health Data Hub, 9 rue Georges Pitard, 75015 Paris, France.

Sophie Prevot (S)

Pathologie, CHU Bicêtre, AP-HP, 78, rue du Général Leclerc, 94270 Le Kremlin-Bicêtre, France.

Philippe Bertheau (P)

Pathologie, CHU Saint-Louis, AP-HP, et université de Paris, 1, avenue Claude Vellefaux, 75010 Paris, France. Electronic address: philippe.bertheau@gmail.com.

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Classifications MeSH