Parametric Copula-GP model for analyzing multidimensional neuronal and behavioral relationships.
Journal
PLoS computational biology
ISSN: 1553-7358
Titre abrégé: PLoS Comput Biol
Pays: United States
ID NLM: 101238922
Informations de publication
Date de publication:
01 2022
01 2022
Historique:
received:
10
06
2021
accepted:
02
01
2022
revised:
09
02
2022
pubmed:
29
1
2022
medline:
22
2
2022
entrez:
28
1
2022
Statut:
epublish
Résumé
One of the main goals of current systems neuroscience is to understand how neuronal populations integrate sensory information to inform behavior. However, estimating stimulus or behavioral information that is encoded in high-dimensional neuronal populations is challenging. We propose a method based on parametric copulas which allows modeling joint distributions of neuronal and behavioral variables characterized by different statistics and timescales. To account for temporal or spatial changes in dependencies between variables, we model varying copula parameters by means of Gaussian Processes (GP). We validate the resulting Copula-GP framework on synthetic data and on neuronal and behavioral recordings obtained in awake mice. We show that the use of a parametric description of the high-dimensional dependence structure in our method provides better accuracy in mutual information estimation in higher dimensions compared to other non-parametric methods. Moreover, by quantifying the redundancy between neuronal and behavioral variables, our model exposed the location of the reward zone in an unsupervised manner (i.e., without using any explicit cues about the task structure). These results demonstrate that the Copula-GP framework is particularly useful for the analysis of complex multidimensional relationships between neuronal, sensory and behavioral variables.
Identifiants
pubmed: 35089913
doi: 10.1371/journal.pcbi.1009799
pii: PCOMPBIOL-D-21-01071
pmc: PMC8827448
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e1009799Subventions
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/T007907/1
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 102857/Z/13/Z
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/N013166/1
Pays : United Kingdom
Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
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