Conformation and dynamic interactions of the multipartite genome in

Agrobacterium tumefaciens / genetics Bacterial Proteins / genetics Cell Cycle / genetics Chromosomes, Bacterial Genome, Bacterial Replicon
Agrobacterium tumefaciens ChIP-seq Hi-C ParB SMC

Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
08 02 2022
Historique:
accepted: 20 12 2021
entrez: 1 2 2022
pubmed: 2 2 2022
medline: 8 3 2022
Statut: ppublish

Résumé

Bacterial species from diverse phyla contain multiple replicons, yet how these multipartite genomes are organized and segregated during the cell cycle remains poorly understood.

Identifiants

DOI: 10.1073/pnas.2115854119 PMID: 35101983 PMC: PMC8833148
pubmed: 35101983
pii: 2115854119
doi: 10.1073/pnas.2115854119
pmc: PMC8833148
pii:
doi:

Substances chimiques

Bacterial Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIGMS NIH HHS
ID : R01 GM120337
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM141242
Pays : United States

Informations de copyright

Copyright © 2022 the Author(s). Published by PNAS.

Déclaration de conflit d'intérêts

The authors declare no competing interest.

Références

Science. 2009 Oct 9;326(5950):289-93
pubmed: 19815776
Science. 2013 Nov 8;342(6159):731-4
pubmed: 24158908
Curr Biol. 2014 Feb 3;24(3):293-8
pubmed: 24440399
Nat Rev Microbiol. 2012 Nov;10(11):755-65
pubmed: 23070556
Mol Microbiol. 2007 May;64(3):703-18
pubmed: 17462018
J Bacteriol. 1975 Jul;123(1):255-64
pubmed: 1141196
Appl Environ Microbiol. 2008 Aug;74(16):5053-62
pubmed: 18606801
Nat Cell Biol. 2010 Aug;12(8):791-8
pubmed: 20657594
J Bacteriol. 2007 Dec;189(23):8693-703
pubmed: 17905987
Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26366-26373
pubmed: 33024016
Science. 2021 May 28;372(6545):984-989
pubmed: 34045355
Cell. 2008 Oct 3;135(1):74-84
pubmed: 18854156
Mol Cell. 2020 Apr 16;78(2):250-260.e5
pubmed: 32097603
Curr Biol. 2014 Feb 3;24(3):287-92
pubmed: 24440393
Cell. 2018 Feb 8;172(4):771-783.e18
pubmed: 29358050
Biochim Biophys Acta. 2012 Jul;1819(7):826-9
pubmed: 22306663
Proc Natl Acad Sci U S A. 2004 Aug 24;101(34):12592-7
pubmed: 15299144
J Genet. 2018 Sep;97(4):1013-1038
pubmed: 30262715
Mol Cell. 2021 Feb 4;81(3):459-472.e10
pubmed: 33382984
Mol Microbiol. 2016 Jun;100(5):808-23
pubmed: 26853523
Proc Natl Acad Sci U S A. 2019 Apr 23;116(17):8149-8154
pubmed: 30962387
Mol Microbiol. 2006 Oct;62(2):331-8
pubmed: 17020576
Genes Dev. 2015 Aug 1;29(15):1661-75
pubmed: 26253537
J Bacteriol. 2017 Aug 8;199(17):
pubmed: 28630129
PLoS Genet. 2014 Feb 27;10(2):e1004184
pubmed: 24586205
Mol Gen Genet. 1987 Jun;208(1-2):301-8
pubmed: 3112522
J Bacteriol. 2016 Jun 13;198(13):1883-1891
pubmed: 27137498
Science. 2001 Dec 14;294(5550):2317-23
pubmed: 11743193
Appl Environ Microbiol. 2010 Dec;76(23):7881-4
pubmed: 20935124
Nat Commun. 2014 Jul 09;5:4366
pubmed: 25006695
J Mol Microbiol Biotechnol. 2014;24(5-6):371-83
pubmed: 25732339
mBio. 2019 Jan 2;10(1):
pubmed: 30602584
J Bacteriol. 2012 Sep;194(17):4669-76
pubmed: 22753058
Nat Struct Mol Biol. 2021 Aug;28(8):642-651
pubmed: 34312537
EMBO J. 2012 Mar 21;31(6):1542-55
pubmed: 22286949
Mol Microbiol. 2006 Sep;61(5):1352-61
pubmed: 16925562
Cell. 2009 May 15;137(4):697-707
pubmed: 19450517
Appl Environ Microbiol. 2016 Jul 29;82(16):5015-25
pubmed: 27287320
PLoS Genet. 2014 Jul 10;10(7):e1004448
pubmed: 25010199
Nat Commun. 2020 Mar 20;11(1):1485
pubmed: 32198399
Cell. 2009 May 15;137(4):685-96
pubmed: 19450516
Nat Commun. 2021 Sep 1;12(1):5222
pubmed: 34471115
G3 (Bethesda). 2019 Oct 7;9(10):3489-3500
pubmed: 31451548
Mol Cell. 2015 Aug 20;59(4):588-602
pubmed: 26295962
Annu Rev Cell Dev Biol. 2015;31:171-99
pubmed: 26566111
Cell Rep. 2020 Nov 3;33(5):108344
pubmed: 33147461
Biophys J. 2017 Apr 11;112(7):1489-1502
pubmed: 28402891
Cell Rep. 2017 Aug 29;20(9):2057-2071
pubmed: 28854358
J Bacteriol. 2003 Jun;185(11):3384-91
pubmed: 12754237
Nat Rev Genet. 2013 Mar;14(3):191-203
pubmed: 23400100
Proc Natl Acad Sci U S A. 2015 Sep 15;112(37):11666-71
pubmed: 26324921
EMBO J. 2013 May 2;32(9):1238-49
pubmed: 23443047
mBio. 2017 Nov 14;8(6):
pubmed: 29138309
Proc Natl Acad Sci U S A. 2016 Nov 15;113(46):E7268-E7276
pubmed: 27799522
Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):1697-701
pubmed: 22307633
Proc Natl Acad Sci U S A. 2019 May 28;116(22):10962-10967
pubmed: 31085632
Nature. 2000 Aug 3;406(6795):477-83
pubmed: 10952301
Elife. 2015 May 07;4:
pubmed: 25951515
Genes Dev. 2006 Dec 1;20(23):3269-82
pubmed: 17158745
J Bacteriol. 2017 Aug 8;199(17):
pubmed: 28630123
Proc Natl Acad Sci U S A. 2007 Jun 19;104(25):10559-64
pubmed: 17563360
Proc Natl Acad Sci U S A. 1994 May 24;91(11):4639-43
pubmed: 8197112
Curr Protoc Microbiol. 2012 Feb;Chapter 1:Unit3D.1
pubmed: 22307549
Microbiol Mol Biol Rev. 2017 Aug 9;81(3):
pubmed: 28794225
J Bacteriol. 2004 Jul;186(14):4492-501
pubmed: 15231781
Sci Adv. 2016 Apr 22;2(4):e1501914
pubmed: 27152358
Proc Natl Acad Sci U S A. 2008 Oct 7;105(40):15435-40
pubmed: 18824683

Auteurs

Zhongqing Ren (Z)

Department of Biology, Indiana University, Bloomington, IN 47405.
ORCID: 0000-0003-1788-5362

Qin Liao (Q)

Department of Biology, Indiana University, Bloomington, IN 47405.
ORCID: 0000-0003-1212-4134

Xheni Karaboja (X)

Department of Biology, Indiana University, Bloomington, IN 47405.

Ian S Barton (IS)

Department of Biology, Indiana University, Bloomington, IN 47405.
ORCID: 0000-0002-0461-0522

Eli G Schantz (EG)

Department of Biology, Indiana University, Bloomington, IN 47405.

Adrian Mejia-Santana (A)

Department of Biology, Indiana University, Bloomington, IN 47405.
ORCID: 0000-0002-4206-1384

Clay Fuqua (C)

Department of Biology, Indiana University, Bloomington, IN 47405.
ORCID: 0000-0001-7051-1760

Xindan Wang (X)

Department of Biology, Indiana University, Bloomington, IN 47405 xindan@indiana.edu.
ORCID: 0000-0001-6458-180X

Articles similaires

Atomic view of photosynthetic metabolite permeability pathways and confinement in synthetic carboxysome shells.

Daipayan Sarkar, Christopher Maffeo, Markus Sutter et al.
1.00
Photosynthesis Ribulose-Bisphosphate Carboxylase Carbon Dioxide Molecular Dynamics Simulation Cyanobacteria

Comparative genomic analysis and characterization of novel high-quality draft genomes from the coal metagenome.

Arunmozhi Bharathi Achudhan, Lilly M Saleena
1.00
Coal Metagenome Phylogeny Bacteria Genome, Bacterial

From cactus to crop: genomic insights of a beneficial and non-pathogenic Curtobacterium flaccumfaciens strain and the evolution of its pathosystem.

Dilson Fagundes Ribeiro, Jéssica Pereira de Matos, Lorrana Cachuite Mendes Rocha et al.
1.00
Genome, Bacterial Virulence Phylogeny Genomics Plant Diseases

Polyphasic identification of Vibrio species from aquatic sources using mass spectrometry, housekeeping gene sequencing and whole genome analysis.

Anna Luiza Bauer Canellas, Adriana Rocha Faria, Gabriel Rodrigues Dias et al.
1.00
Vibrio Whole Genome Sequencing Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization Genome, Bacterial Water Microbiology

Classifications MeSH

questionsmedicales.fr › Bactéries › Proteobacteria › Alphaproteobacteria › Rhizobiaceae › Agrobacterium › Agrobacterium tumefaciens › Conformation and dynamic interactions of the...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines bactériennes › Conformation and dynamic interactions of the...
questionsmedicales.fr › Phénomènes physiologiques cellulaires › Cycle cellulaire › Conformation and dynamic interactions of the...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Chromosomes › Chromosomes de bactérie › Conformation and dynamic interactions of the...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome bactérien › Conformation and dynamic interactions of the...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Réplicon › Conformation and dynamic interactions of the...