The Probiotic Identity Card: A Novel "Probiogenomics" Approach to Investigate Probiotic Supplements.

cell viability flow cytometry genomics metagenomics probiotics

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2021
Historique:
received: 07 10 2021
accepted: 14 12 2021
entrez: 7 2 2022
pubmed: 8 2 2022
medline: 8 2 2022
Statut: epublish

Résumé

Probiotic bacteria are widely administered as dietary supplements and incorporated as active ingredients in a variety of functional foods due to their purported health-promoting features. Currently available probiotic products may have issues with regards to their formulation, such as insufficient levels of viable probiotic bacteria, complete lack of probiotic strains that are stated to be present in the product, and the presence of microbial contaminants. To avoid the distribution of such unsuitable or misleading products, we propose here a novel approach named Probiotic Identity Card (PIC), involving a combination of shotgun metagenomic sequencing and bacterial cell enumeration by flow cytometry. PIC was tested on 12 commercial probiotic supplements revealing several inconsistencies in the formulation of five such products based on their stated microbial composition and viability.

Identifiants

pubmed: 35126330
doi: 10.3389/fmicb.2021.790881
pmc: PMC8814603
doi:

Types de publication

Journal Article

Langues

eng

Pagination

790881

Informations de copyright

Copyright © 2022 Lugli, Longhi, Alessandri, Mancabelli, Tarracchini, Fontana, Turroni, Milani, Di Pierro, van Sinderen and Ventura.

Déclaration de conflit d'intérêts

GL and FF were employed by GenProbio Srl. FD was employed by company Velleja Research. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Gabriele Andrea Lugli (GA)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.

Giulia Longhi (G)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
GenProbio Srl, Parma, Italy.

Giulia Alessandri (G)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.

Leonardo Mancabelli (L)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.

Chiara Tarracchini (C)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.

Federico Fontana (F)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
GenProbio Srl, Parma, Italy.

Francesca Turroni (F)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
Microbiome Research Hub, University of Parma, Parma, Italy.

Christian Milani (C)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
Microbiome Research Hub, University of Parma, Parma, Italy.

Francesco Di Pierro (F)

Velleja Research, Milan, Italy.
Digestive Endoscopy Unit and Gastroenterology, Fondazione Poliambulanza, Brescia, Italy.

Douwe van Sinderen (D)

APC Microbiome Institute and School of Microbiology, Bioscience Institute, National University of Ireland, Cork, Ireland.

Marco Ventura (M)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
Microbiome Research Hub, University of Parma, Parma, Italy.

Classifications MeSH