Dynamic modeling of hospitalized COVID-19 patients reveals disease state-dependent risk factors.
COVID-19
disease progression
hidden Markov model
patient trajectory
risk factors
Journal
Journal of the American Medical Informatics Association : JAMIA
ISSN: 1527-974X
Titre abrégé: J Am Med Inform Assoc
Pays: England
ID NLM: 9430800
Informations de publication
Date de publication:
13 04 2022
13 04 2022
Historique:
received:
19
10
2021
revised:
15
12
2021
accepted:
28
01
2022
pubmed:
10
2
2022
medline:
16
4
2022
entrez:
9
2
2022
Statut:
ppublish
Résumé
The study sought to investigate the disease state-dependent risk profiles of patient demographics and medical comorbidities associated with adverse outcomes of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections. A covariate-dependent, continuous-time hidden Markov model with 4 states (moderate, severe, discharged, and deceased) was used to model the dynamic progression of COVID-19 during the course of hospitalization. All model parameters were estimated using the electronic health records of 1362 patients from ProMedica Health System admitted between March 20, 2020 and December 29, 2020 with a positive nasopharyngeal PCR test for SARS-CoV-2. Demographic characteristics, comorbidities, vital signs, and laboratory test results were retrospectively evaluated to infer a patient's clinical progression. The association between patient-level covariates and risk of progression was found to be disease state dependent. Specifically, while being male, being Black or having a medical comorbidity were all associated with an increased risk of progressing from the moderate disease state to the severe disease state, these same factors were associated with a decreased risk of progressing from the severe disease state to the deceased state. Recent studies have not included analyses of the temporal progression of COVID-19, making the current study a unique modeling-based approach to understand the dynamics of COVID-19 in hospitalized patients. Dynamic risk stratification models have the potential to improve clinical outcomes not only in COVID-19, but also in a myriad of other acute and chronic diseases that, to date, have largely been assessed only by static modeling techniques.
Identifiants
pubmed: 35137149
pii: 6523927
doi: 10.1093/jamia/ocac012
pmc: PMC8903413
doi:
Types de publication
Journal Article
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
864-872Subventions
Organisme : Lawrence Livermore National Laboratory (LLNL) Laboratory Directed Research and Development (LDRD) Program
ID : 19-ERD-009
Organisme : University of Toledo Women and Philanthropy Genetic Analysis Instrumentation Center
Organisme : The University of Toledo Medical Research Society
Organisme : David and Helen Boone Foundation Research Fund
Informations de copyright
© The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.
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