Interinstitutional Portability of a Deep Learning Brain MRI Lesion Segmentation Algorithm.
Brain/Brain Stem
Neural Networks
Segmentation
Journal
Radiology. Artificial intelligence
ISSN: 2638-6100
Titre abrégé: Radiol Artif Intell
Pays: United States
ID NLM: 101746556
Informations de publication
Date de publication:
Jan 2022
Jan 2022
Historique:
received:
23
06
2020
revised:
28
09
2021
accepted:
22
10
2021
entrez:
11
2
2022
pubmed:
12
2
2022
medline:
12
2
2022
Statut:
epublish
Résumé
To assess how well a brain MRI lesion segmentation algorithm trained at one institution performed at another institution, and to assess the effect of multi-institutional training datasets for mitigating performance loss. In this retrospective study, a three-dimensional U-Net for brain MRI abnormality segmentation was trained on data from 293 patients from one institution (IN1) (median age, 54 years; 165 women; patients treated between 2008 and 2018) and tested on data from 51 patients from a second institution (IN2) (median age, 46 years; 27 women; patients treated between 2003 and 2019). The model was then trained on additional data from various sources: The U-Net accurately segmented brain MRI lesions across various pathologic conditions. Performance was lower when tested at an external institution (median Dice score, 0.70 [IN2] vs 0.76 [IN1]). Addition of 483 training cases of a single pathologic condition, including from IN2, did not raise performance (median Dice score, 0.72; For brain MRI lesion segmentation, adding a modest amount of relevant training data from an external institution to a previously trained model supported successful application of the model to this external institution.
Identifiants
pubmed: 35146430
doi: 10.1148/ryai.2021200152
pmc: PMC8823451
doi:
Types de publication
Journal Article
Langues
eng
Pagination
e200152Subventions
Organisme : NIBIB NIH HHS
ID : T32 EB001631
Pays : United States
Informations de copyright
2021 by the Radiological Society of North America, Inc.
Déclaration de conflit d'intérêts
Disclosures of conflicts of interest: A.M.R. Institution received American Society of Neuroradiology (ASNR) trainee grant and Carestream Health/Radiological Society of North America (RSNA) research scholar grant; former member of Radiology: Artificial Intelligence trainee editorial board. T.J.G. No relevant relationships. P.N. Formerly employed by Perceus and PrinterPress (urologic devices and orthopedic devices); grants/grants pending from Perceus for a urology device; patent from Perceus for a urology device; stock/stock options in PrinterPress (orthopedic devices). M.T.D. No relevant relationships. D.A.W. Consultancy fee from Galileo CDS for work not related to this publication; stock/stock options in Galileo CDS received for work not related to this publication. E.C. No relevant relationships. J.B.C. No relevant relationships. L.P.S. No relevant relationships. J.D.R. Institution received ASNR neuroradiology research grant in AI; former member of Radiology: Artificial Intelligence trainee editorial board. C.P.H. Medical imaging consultant for GE Healthcare; research travel expenses from Siemens Healthineers; member of data monitoring and safety boards for Insightec and UniQure; former member of Radiology editorial board.
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