Epidemiological, Clinical, and Phylogenetic Characteristics of the First SARS-CoV-2 Transmission in a Nursing Home of Singapore: A Prospective Observational Investigation.
epidemiology
genomic epidemiology
infection prevention and control
nursing home
public health
Journal
Frontiers in medicine
ISSN: 2296-858X
Titre abrégé: Front Med (Lausanne)
Pays: Switzerland
ID NLM: 101648047
Informations de publication
Date de publication:
2021
2021
Historique:
received:
06
10
2021
accepted:
15
12
2021
entrez:
14
2
2022
pubmed:
15
2
2022
medline:
15
2
2022
Statut:
epublish
Résumé
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission has resulted in a significant burden among nursing home facilities globally. This prospective observational cohort study aims to define the potential sources of introduction and characteristics of SARS-CoV-2 transmission of the first nursing home facility in Singapore. An epidemiological serial point-prevalence survey of SARS-CoV-2 was conducted among 108 residents and 56 healthcare staff (HCS). In the current study, 14 (13%) residents and two (3.6%) HCS were diagnosed with coronavirus disease 2019 (COVID-19), with a case fatality rate (CFR) of 28.6% (4/14) among the residents. The median age of the infected residents was 86.5 [interquartile range (IQR) 78.5-88] and 85.7% were women. Five residents were symptomatic (35.7%) and the others were asymptomatic (64.3%). A higher proportion of residents who succumbed to COVID-19 had hypertension than those who recovered. The SARS-CoV-2 whole-genome sequencing showed lineage B.6 which is rare globally but common regionally during the early phase of the pandemic. Household transmission is a potential source of introduction into the nursing home, with at least six epidemiologically linked secondary cases. Male residents were less implicated due to the staff segregation plan by block. Among residents, a higher proportion of the non-survivors were asymptomatic and had hypertension compared with survivors.
Identifiants
pubmed: 35155470
doi: 10.3389/fmed.2021.790177
pmc: PMC8831716
doi:
Types de publication
Journal Article
Langues
eng
Pagination
790177Informations de copyright
Copyright © 2022 Pang, Tan, Mak, Octavia, Maurer-Stroh, Sirota, Chan, Leong, Koh, Ooi, Vasoo, Fisher, Cui, Rafman, Cutter and Lee.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
J Am Med Dir Assoc. 2020 Jul;21(7):893-894
pubmed: 32389592
Lancet. 2020 Mar 28;395(10229):1039-1046
pubmed: 32192580
JAMA Intern Med. 2020 Aug 01;180(8):1101-1105
pubmed: 32437547
J Microbiol Immunol Infect. 2021 Feb;54(1):123-124
pubmed: 32405290
N Engl J Med. 2020 May 21;382(21):2005-2011
pubmed: 32220208
Euro Surveill. 2017 Mar 30;22(13):
pubmed: 28382917
bioRxiv. 2020 Sep 04;:
pubmed: 32908977
Lancet. 2021 Jan 9;397(10269):93-94
pubmed: 33347812
Adv Respir Med. 2020;88(3):173-175
pubmed: 32706099
Nat Methods. 2017 Jun;14(6):587-589
pubmed: 28481363
Lancet Infect Dis. 2020 Jul;20(7):809-815
pubmed: 32330439
Euro Surveill. 2020 Jun;25(22):
pubmed: 32524949
Mol Biol Evol. 2013 Apr;30(4):772-80
pubmed: 23329690
Clin Infect Dis. 2020 Dec 31;71(11):2920-2926
pubmed: 32548628
JAMA Netw Open. 2020 Jul 1;3(7):e2015957
pubmed: 32697325
J Am Geriatr Soc. 2020 Jul;68(7):E36-E37
pubmed: 32343395
J Am Med Dir Assoc. 2020 Jul;21(7):888-892
pubmed: 32674814
J Infect. 2020 Sep;81(3):411-419
pubmed: 32504743
Science. 2020 Jul 31;369(6503):582-587
pubmed: 32513865
JAMA. 2020 Jul 7;324(1):25-26
pubmed: 32501504
N Engl J Med. 2020 Mar 19;382(12):1177-1179
pubmed: 32074444
J Microbiol Immunol Infect. 2020 Jun;53(3):447-453
pubmed: 32303480
Bioinformatics. 2009 May 1;25(9):1189-91
pubmed: 19151095
JAMA. 2020 Apr 21;323(15):1488-1494
pubmed: 32125362
N Engl J Med. 2020 May 28;382(22):2081-2090
pubmed: 32329971
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
MMWR Morb Mortal Wkly Rep. 2020 May 29;69(21):651-655
pubmed: 32463809
Mol Biol Evol. 2018 Feb 1;35(2):518-522
pubmed: 29077904
Lancet Healthy Longev. 2020 Nov;1(2):e80-e88
pubmed: 33521770
MMWR Morb Mortal Wkly Rep. 2020 Apr 10;69(14):411-415
pubmed: 32271722
Lancet Infect Dis. 2021 Mar;21(3):333-343
pubmed: 33152271
Nucleic Acids Res. 1997 Sep 1;25(17):3389-402
pubmed: 9254694