Epidemiological, Clinical, and Phylogenetic Characteristics of the First SARS-CoV-2 Transmission in a Nursing Home of Singapore: A Prospective Observational Investigation.

epidemiology genomic epidemiology infection prevention and control nursing home public health

Journal

Frontiers in medicine
ISSN: 2296-858X
Titre abrégé: Front Med (Lausanne)
Pays: Switzerland
ID NLM: 101648047

Informations de publication

Date de publication:
2021
Historique:
received: 06 10 2021
accepted: 15 12 2021
entrez: 14 2 2022
pubmed: 15 2 2022
medline: 15 2 2022
Statut: epublish

Résumé

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission has resulted in a significant burden among nursing home facilities globally. This prospective observational cohort study aims to define the potential sources of introduction and characteristics of SARS-CoV-2 transmission of the first nursing home facility in Singapore. An epidemiological serial point-prevalence survey of SARS-CoV-2 was conducted among 108 residents and 56 healthcare staff (HCS). In the current study, 14 (13%) residents and two (3.6%) HCS were diagnosed with coronavirus disease 2019 (COVID-19), with a case fatality rate (CFR) of 28.6% (4/14) among the residents. The median age of the infected residents was 86.5 [interquartile range (IQR) 78.5-88] and 85.7% were women. Five residents were symptomatic (35.7%) and the others were asymptomatic (64.3%). A higher proportion of residents who succumbed to COVID-19 had hypertension than those who recovered. The SARS-CoV-2 whole-genome sequencing showed lineage B.6 which is rare globally but common regionally during the early phase of the pandemic. Household transmission is a potential source of introduction into the nursing home, with at least six epidemiologically linked secondary cases. Male residents were less implicated due to the staff segregation plan by block. Among residents, a higher proportion of the non-survivors were asymptomatic and had hypertension compared with survivors.

Identifiants

pubmed: 35155470
doi: 10.3389/fmed.2021.790177
pmc: PMC8831716
doi:

Types de publication

Journal Article

Langues

eng

Pagination

790177

Informations de copyright

Copyright © 2022 Pang, Tan, Mak, Octavia, Maurer-Stroh, Sirota, Chan, Leong, Koh, Ooi, Vasoo, Fisher, Cui, Rafman, Cutter and Lee.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Junxiong Pang (J)

Ministry of Health, Singapore, Singapore.
Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore, Singapore.

Huei Nuo Tan (HN)

Department of Geriatric Medicine, Tan Tock Seng Hospital, Singapore, Singapore.

Tze Minn Mak (TM)

National Public Health Laboratory, National Centre for Infectious Diseases, Singapore, Singapore.

Sophie Octavia (S)

National Public Health Laboratory, National Centre for Infectious Diseases, Singapore, Singapore.

Sebastian Maurer-Stroh (S)

National Public Health Laboratory, National Centre for Infectious Diseases, Singapore, Singapore.
Bioinformatics Institute, Agency for Science, Technology and Research, Singapore, Singapore.
Department of Biological Sciences, National University of Singapore, Singapore, Singapore.

Fernanda L Sirota (FL)

Bioinformatics Institute, Agency for Science, Technology and Research, Singapore, Singapore.
Genome Institute of Singapore and Bioinformatics Institute, Agency for Science, Technology and Research, Singapore, Singapore.

Mark Peng Chew Chan (MPC)

Department of Geriatric Medicine, Tan Tock Seng Hospital, Singapore, Singapore.

Ian Yi Onn Leong (IYO)

Division of Central Health, Tan Tock Seng Hospital, Singapore, Singapore.

Valerie T J Koh (VTJ)

Ministry of Health, Singapore, Singapore.

Peng Lim Ooi (PL)

Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore, Singapore.
National Public Health and Epidemiology Unit, National Centre for Infectious Diseases, Singapore, Singapore.

Shawn Vasoo (S)

National Public Health and Epidemiology Unit, National Centre for Infectious Diseases, Singapore, Singapore.

Dale Fisher (D)

Yong Loo Lin School of Medicine, National University Hospital and National University Health System, Singapore, Singapore.

Lin Cui (L)

National Public Health Laboratory, National Centre for Infectious Diseases, Singapore, Singapore.

Heidi Rafman (H)

Agency for Integrated Care, Singapore, Singapore.

Jeffery Cutter (J)

Ministry of Health, Singapore, Singapore.
National Public Health and Epidemiology Unit, National Centre for Infectious Diseases, Singapore, Singapore.

Vernon J Lee (VJ)

Ministry of Health, Singapore, Singapore.
Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore, Singapore.

Classifications MeSH