Learning residual motion correction for fast and robust 3D multiparametric MRI.


Journal

Medical image analysis
ISSN: 1361-8423
Titre abrégé: Med Image Anal
Pays: Netherlands
ID NLM: 9713490

Informations de publication

Date de publication:
04 2022
Historique:
received: 20 08 2021
revised: 25 11 2021
accepted: 01 02 2022
pubmed: 19 2 2022
medline: 20 4 2022
entrez: 18 2 2022
Statut: ppublish

Résumé

Voluntary and involuntary patient motion is a major problem for data quality in clinical routine of Magnetic Resonance Imaging (MRI). It has been thoroughly investigated and, yet it still remains unresolved. In quantitative MRI, motion artifacts impair the entire temporal evolution of the magnetization and cause errors in parameter estimation. Here, we present a novel strategy based on residual learning for retrospective motion correction in fast 3D whole-brain multiparametric MRI. We propose a 3D multiscale convolutional neural network (CNN) that learns the non-linear relationship between the motion-affected quantitative parameter maps and the residual error to their motion-free reference. For supervised model training, despite limited data availability, we propose a physics-informed simulation to generate self-contained paired datasets from a priori motion-free data. We evaluate motion-correction performance of the proposed method for the example of 3D Quantitative Transient-state Imaging at 1.5T and 3T. We show the robustness of the motion correction for various motion regimes and demonstrate the generalization capabilities of the residual CNN in terms of real-motion in vivo data of healthy volunteers and clinical patient cases, including pediatric and adult patients with large brain lesions. Our study demonstrates that the proposed motion correction outperforms current state of the art, reliably providing a high, clinically relevant image quality for mild to pronounced patient movements. This has important implications in clinical setups where large amounts of motion affected data must be discarded as they are rendered diagnostically unusable.

Identifiants

pubmed: 35180675
pii: S1361-8415(22)00039-1
doi: 10.1016/j.media.2022.102387
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

102387

Informations de copyright

Copyright © 2022. Published by Elsevier B.V.

Déclaration de conflit d'intérêts

Declaration of Competing Interest Carolin M. Pirkl and Marion I. Menzel are employees at GE Healthcare, Munich, Germany. Matteo Cencini and Michela Tosetti receive research funding from GE Healthcare. All other authors declare that they do not have any financial or non-financial conflict of interests.

Auteurs

Carolin M Pirkl (CM)

Department of Computer Science, Technical University of Munich, Garching, Germany; GE Healthcare, Munich, Germany. Electronic address: carolin.pirkl@tum.de.

Matteo Cencini (M)

IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.

Jan W Kurzawski (JW)

Pisa Division, National Institute for Nuclear Physics (INFN), Pisa, Italy.

Diana Waldmannstetter (D)

Department of Computer Science, Technical University of Munich, Garching, Germany; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland.

Hongwei Li (H)

Department of Computer Science, Technical University of Munich, Garching, Germany; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland.

Anjany Sekuboyina (A)

Department of Computer Science, Technical University of Munich, Garching, Germany; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland; Department of Neuroradiology, Klinikum rechts der Isar, Munich, Germany.

Sebastian Endt (S)

Department of Computer Science, Technical University of Munich, Garching, Germany; GE Healthcare, Munich, Germany.

Luca Peretti (L)

Department of Computer Science, University of Pisa, Pisa, Italy; IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.

Graziella Donatelli (G)

Azienda Ospedaliero-Universitaria Pisana, Pisa Italy; Fondazione Imago7, Pisa, Italy.

Rosa Pasquariello (R)

IRCCS Fondazione Stella Maris, Pisa, Italy.

Mauro Costagli (M)

IRCCS Fondazione Stella Maris, Pisa, Italy; Department of Neuroscience, Rehabilitation, Ophtalmology, Genetics, Maternal and Child Sciences (DINOGMI), University of Genova, Genova, Italy.

Guido Buonincontri (G)

IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.

Michela Tosetti (M)

IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.

Marion I Menzel (MI)

AImotion Bavaria, Faculty of Electrical Engineering and Information Technology, Technische Hochschule Ingolstadt, Ingolstadt, Germany; GE Healthcare, Munich, Germany; Department of Physics, Technical University of Munich, Garching, Germany.

Bjoern H Menze (BH)

Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland; Department of Computer Science, Technical University of Munich, Garching, Germany.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH